BLASTX nr result

ID: Atractylodes21_contig00037534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037534
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305884.1| condensin complex components subunit [Populu...   145   3e-33
ref|XP_003552880.1| PREDICTED: condensin complex subunit 3-like ...   137   7e-31
ref|XP_003537443.1| PREDICTED: condensin complex subunit 3-like ...   137   7e-31
ref|NP_198579.2| condensin complex subunit 3 [Arabidopsis thalia...   135   3e-30
dbj|BAB08309.1| unnamed protein product [Arabidopsis thaliana]        135   3e-30

>ref|XP_002305884.1| condensin complex components subunit [Populus trichocarpa]
           gi|222848848|gb|EEE86395.1| condensin complex components
           subunit [Populus trichocarpa]
          Length = 289

 Score =  145 bits (367), Expect = 3e-33
 Identities = 76/103 (73%), Positives = 86/103 (83%)
 Frame = -3

Query: 311 PLIRTFSVRALSRFANDAENSDIXXXXXXXXXXEQNPDVRKTILLCLPPCNATSTSIINC 132
           P IRTF+VRALSRFAND ENSDI          EQN +VRKTI+L LPP NATS +II+C
Sbjct: 53  PAIRTFAVRALSRFANDTENSDILDLFLEVLPLEQNAEVRKTIVLALPPSNATSPAIIDC 112

Query: 131 TLDVSESVRKAAYCVIASKFPLQSLSIKQRTIILQRGLADRSA 3
           TLD+SESVRKAA+CV+A+KFPLQSLSIK RT+ILQRGLADRSA
Sbjct: 113 TLDMSESVRKAAFCVLANKFPLQSLSIKLRTVILQRGLADRSA 155


>ref|XP_003552880.1| PREDICTED: condensin complex subunit 3-like [Glycine max]
          Length = 1096

 Score =  137 bits (346), Expect = 7e-31
 Identities = 72/102 (70%), Positives = 83/102 (81%)
 Frame = -3

Query: 311 PLIRTFSVRALSRFANDAENSDIXXXXXXXXXXEQNPDVRKTILLCLPPCNATSTSIINC 132
           P++RTF+VRALSRF ND+ NSDI          EQN DVRK I+L LPP +ATS  II+C
Sbjct: 217 PVVRTFAVRALSRFVNDSVNSDILDLFLEVLPLEQNADVRKMIVLSLPPSSATSQVIIDC 276

Query: 131 TLDVSESVRKAAYCVIASKFPLQSLSIKQRTIILQRGLADRS 6
           TLDVSESVRKAAYCV+A+KFPLQSLSIK RT+IL+RGLADRS
Sbjct: 277 TLDVSESVRKAAYCVLANKFPLQSLSIKLRTVILRRGLADRS 318


>ref|XP_003537443.1| PREDICTED: condensin complex subunit 3-like [Glycine max]
          Length = 1033

 Score =  137 bits (346), Expect = 7e-31
 Identities = 72/102 (70%), Positives = 83/102 (81%)
 Frame = -3

Query: 311 PLIRTFSVRALSRFANDAENSDIXXXXXXXXXXEQNPDVRKTILLCLPPCNATSTSIINC 132
           P++RTF+VRALSRF ND+ NSDI          EQN DVRK I+L LPP +ATS  II+C
Sbjct: 154 PVVRTFAVRALSRFVNDSVNSDILDLFLEVLPLEQNADVRKMIVLSLPPSSATSQVIIDC 213

Query: 131 TLDVSESVRKAAYCVIASKFPLQSLSIKQRTIILQRGLADRS 6
           TLDVSESVRKAAYCV+A+KFPLQSLSIK RT+IL+RGLADRS
Sbjct: 214 TLDVSESVRKAAYCVLANKFPLQSLSIKLRTVILRRGLADRS 255


>ref|NP_198579.2| condensin complex subunit 3 [Arabidopsis thaliana]
           gi|332006829|gb|AED94212.1| condensin complex subunit 3
           [Arabidopsis thaliana]
          Length = 1051

 Score =  135 bits (341), Expect = 3e-30
 Identities = 71/102 (69%), Positives = 83/102 (81%)
 Frame = -3

Query: 311 PLIRTFSVRALSRFANDAENSDIXXXXXXXXXXEQNPDVRKTILLCLPPCNATSTSIINC 132
           P+IRTF+VR+LSRF ND ENSDI          EQNP+VRKTI+L LPP NAT+ +II+C
Sbjct: 175 PVIRTFAVRSLSRFVNDPENSDILDLLLEVLPLEQNPEVRKTIVLSLPPSNATTQAIIDC 234

Query: 131 TLDVSESVRKAAYCVIASKFPLQSLSIKQRTIILQRGLADRS 6
           TLDV+ESVRKAAY V+A+K PLQSLSIK RT ILQRGLADR+
Sbjct: 235 TLDVNESVRKAAYSVLANKVPLQSLSIKLRTTILQRGLADRA 276


>dbj|BAB08309.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1076

 Score =  135 bits (341), Expect = 3e-30
 Identities = 71/102 (69%), Positives = 83/102 (81%)
 Frame = -3

Query: 311 PLIRTFSVRALSRFANDAENSDIXXXXXXXXXXEQNPDVRKTILLCLPPCNATSTSIINC 132
           P+IRTF+VR+LSRF ND ENSDI          EQNP+VRKTI+L LPP NAT+ +II+C
Sbjct: 175 PVIRTFAVRSLSRFVNDPENSDILDLLLEVLPLEQNPEVRKTIVLSLPPSNATTQAIIDC 234

Query: 131 TLDVSESVRKAAYCVIASKFPLQSLSIKQRTIILQRGLADRS 6
           TLDV+ESVRKAAY V+A+K PLQSLSIK RT ILQRGLADR+
Sbjct: 235 TLDVNESVRKAAYSVLANKVPLQSLSIKLRTTILQRGLADRA 276


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