BLASTX nr result

ID: Atractylodes21_contig00037461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037461
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273712.2| PREDICTED: transcription initiation factor T...   184   9e-45
emb|CBI21835.3| unnamed protein product [Vitis vinifera]              184   9e-45
ref|XP_003533464.1| PREDICTED: transcription initiation factor T...   179   3e-43
ref|XP_003523903.1| PREDICTED: transcription initiation factor T...   177   6e-43
ref|XP_002893738.1| F6N18.13 [Arabidopsis lyrata subsp. lyrata] ...   175   4e-42

>ref|XP_002273712.2| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Vitis vinifera]
          Length = 2068

 Score =  184 bits (466), Expect = 9e-45
 Identities = 88/115 (76%), Positives = 104/115 (90%), Gaps = 1/115 (0%)
 Frame = -1

Query: 344  GEVGLANILEKILDTLKAN-EVSFLFLKPVTRKEAPDYLKIIERPMDLSTMREKVRRLEY 168
            GEVGL+N+LE I+D+L+   EVS+LFLKPV++KEAPDYL II  PMDLST+REKVR++EY
Sbjct: 1947 GEVGLSNVLESIVDSLRDRYEVSYLFLKPVSKKEAPDYLDIIRDPMDLSTIREKVRKMEY 2006

Query: 167  KSRDGFRHDMWQITFNAHKYNDGRNPGIPPLADQLLELCDFLLSEYDAILMEAEA 3
            K+R+ FRHD+WQIT+NAHKYNDGRNPGIPPLADQLLELCD+LLSE DA L EAEA
Sbjct: 2007 KNREDFRHDVWQITYNAHKYNDGRNPGIPPLADQLLELCDYLLSENDASLTEAEA 2061


>emb|CBI21835.3| unnamed protein product [Vitis vinifera]
          Length = 1798

 Score =  184 bits (466), Expect = 9e-45
 Identities = 88/115 (76%), Positives = 104/115 (90%), Gaps = 1/115 (0%)
 Frame = -1

Query: 344  GEVGLANILEKILDTLKAN-EVSFLFLKPVTRKEAPDYLKIIERPMDLSTMREKVRRLEY 168
            GEVGL+N+LE I+D+L+   EVS+LFLKPV++KEAPDYL II  PMDLST+REKVR++EY
Sbjct: 1677 GEVGLSNVLESIVDSLRDRYEVSYLFLKPVSKKEAPDYLDIIRDPMDLSTIREKVRKMEY 1736

Query: 167  KSRDGFRHDMWQITFNAHKYNDGRNPGIPPLADQLLELCDFLLSEYDAILMEAEA 3
            K+R+ FRHD+WQIT+NAHKYNDGRNPGIPPLADQLLELCD+LLSE DA L EAEA
Sbjct: 1737 KNREDFRHDVWQITYNAHKYNDGRNPGIPPLADQLLELCDYLLSENDASLTEAEA 1791


>ref|XP_003533464.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Glycine max]
          Length = 1910

 Score =  179 bits (453), Expect = 3e-43
 Identities = 85/116 (73%), Positives = 101/116 (87%), Gaps = 2/116 (1%)
 Frame = -1

Query: 344  GEVGLANILEKILDTLKAN--EVSFLFLKPVTRKEAPDYLKIIERPMDLSTMREKVRRLE 171
            GEVGLANILE ++DT+  +  ++S+LFLKPV++KEAPDYL +IERPMDLS +RE+VR +E
Sbjct: 1788 GEVGLANILESVVDTIVKDRYDLSYLFLKPVSKKEAPDYLDVIERPMDLSRIRERVRNME 1847

Query: 170  YKSRDGFRHDMWQITFNAHKYNDGRNPGIPPLADQLLELCDFLLSEYDAILMEAEA 3
            YKSR+ FRHDMWQITFNAHKYNDGRNPGIPPLAD LLE CD+LL+E D  L EAEA
Sbjct: 1848 YKSREDFRHDMWQITFNAHKYNDGRNPGIPPLADMLLEYCDYLLNENDDSLTEAEA 1903


>ref|XP_003523903.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Glycine max]
          Length = 1919

 Score =  177 bits (450), Expect = 6e-43
 Identities = 85/115 (73%), Positives = 100/115 (86%), Gaps = 2/115 (1%)
 Frame = -1

Query: 344  GEVGLANILEKILDTLKAN--EVSFLFLKPVTRKEAPDYLKIIERPMDLSTMREKVRRLE 171
            GEVGLANILE ++DT+  +  ++S+LFLKPV++KEAPDYL IIERPMDLS +RE+VR +E
Sbjct: 1797 GEVGLANILESVVDTIVKDRYDLSYLFLKPVSKKEAPDYLDIIERPMDLSRIRERVRNME 1856

Query: 170  YKSRDGFRHDMWQITFNAHKYNDGRNPGIPPLADQLLELCDFLLSEYDAILMEAE 6
            YKSR+ FRHDMWQITFNAHKYNDGRNPGIPPLAD LLE CD+LL+E D  L EAE
Sbjct: 1857 YKSREDFRHDMWQITFNAHKYNDGRNPGIPPLADMLLEYCDYLLNENDDSLTEAE 1911


>ref|XP_002893738.1| F6N18.13 [Arabidopsis lyrata subsp. lyrata]
            gi|297339580|gb|EFH69997.1| F6N18.13 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1951

 Score =  175 bits (443), Expect = 4e-42
 Identities = 82/114 (71%), Positives = 101/114 (88%), Gaps = 1/114 (0%)
 Frame = -1

Query: 344  GEVGLANILEKILDTLKANE-VSFLFLKPVTRKEAPDYLKIIERPMDLSTMREKVRRLEY 168
            GEVGLANILE+I+DTL+  E VS LFLKPV++KEAPDYL I+E PMDLST+R+KVR++EY
Sbjct: 1831 GEVGLANILERIVDTLRLKEEVSRLFLKPVSKKEAPDYLDIVENPMDLSTIRDKVRKIEY 1890

Query: 167  KSRDGFRHDMWQITFNAHKYNDGRNPGIPPLADQLLELCDFLLSEYDAILMEAE 6
            ++R+ FRHD+WQI +NAH YNDGRNPGIPPLADQLLE+CD+LL +Y+  L EAE
Sbjct: 1891 RNREQFRHDVWQIKYNAHLYNDGRNPGIPPLADQLLEICDYLLDDYEEQLKEAE 1944


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