BLASTX nr result

ID: Atractylodes21_contig00037446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037446
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26949.3| unnamed protein product [Vitis vinifera]              409   e-112
ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helica...   409   e-112
ref|XP_002315906.1| predicted protein [Populus trichocarpa] gi|2...   406   e-111
emb|CAN66462.1| hypothetical protein VITISV_035844 [Vitis vinifera]   406   e-111
ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinu...   404   e-110

>emb|CBI26949.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  409 bits (1052), Expect = e-112
 Identities = 211/284 (74%), Positives = 228/284 (80%), Gaps = 1/284 (0%)
 Frame = -3

Query: 925  YNTWSYDENLLRAVICYGLYPGICSVVHNEKSFSLKTMEDGQVLLHSNSVNARDSKIPYP 746
            YN WSYDE+L+RAVIC GLYPGICSVV NEKSFSLKTMEDGQVLLHSNSVNAR+ KIPYP
Sbjct: 890  YNAWSYDEHLIRAVICCGLYPGICSVVQNEKSFSLKTMEDGQVLLHSNSVNARECKIPYP 949

Query: 745  WLVFNEKIKVNSVFLRDSTAVSDSVLLLFGGTISRGDIEGHLKMLGGYLEFFMEPAVAEM 566
            WLVFNEKIKVNSVFLRDSTAVSDSVLLLFGG I RGD +GHLKMLGGYLEFFM+PA+AEM
Sbjct: 950  WLVFNEKIKVNSVFLRDSTAVSDSVLLLFGGDILRGDGDGHLKMLGGYLEFFMKPAIAEM 1009

Query: 565  YQSLRRELDELFQCKLMNPRMDLHTHHELLSAVRLLLPEDQHNGRFVFNRQVLYSNSKPY 386
            YQSLRRELDEL Q KL+NPRM +H +HELLSAVRLL+ EDQ +GRFVF+ QV     KP 
Sbjct: 1010 YQSLRRELDELIQNKLLNPRMGIHMYHELLSAVRLLISEDQCDGRFVFSHQVGRQVVKPS 1069

Query: 385  VASV-XXXXPLASRVESGPGGDNSKSQLQTLLTRAGYAAPTYRTNQLSNNQFQSICEFNG 209
              SV      L SR ESGPGGDNSKSQLQTLLTRAGYAAPTY+T QL NNQF+S  EFNG
Sbjct: 1070 KTSVTVMPKALVSRTESGPGGDNSKSQLQTLLTRAGYAAPTYKTKQLKNNQFRSTVEFNG 1129

Query: 208  MQIMGHPCNNXXXXXXXXXXXXXEWLTGGNHAGRVLIDSMSMIL 77
            MQIMG PCNN             + L GG  +G   ID MSM+L
Sbjct: 1130 MQIMGQPCNNKKFAEKDAAAEALQLLMGGTQSGHEYIDHMSMLL 1173


>ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
            vinifera]
          Length = 1195

 Score =  409 bits (1052), Expect = e-112
 Identities = 211/284 (74%), Positives = 228/284 (80%), Gaps = 1/284 (0%)
 Frame = -3

Query: 925  YNTWSYDENLLRAVICYGLYPGICSVVHNEKSFSLKTMEDGQVLLHSNSVNARDSKIPYP 746
            YN WSYDE+L+RAVIC GLYPGICSVV NEKSFSLKTMEDGQVLLHSNSVNAR+ KIPYP
Sbjct: 904  YNAWSYDEHLIRAVICCGLYPGICSVVQNEKSFSLKTMEDGQVLLHSNSVNARECKIPYP 963

Query: 745  WLVFNEKIKVNSVFLRDSTAVSDSVLLLFGGTISRGDIEGHLKMLGGYLEFFMEPAVAEM 566
            WLVFNEKIKVNSVFLRDSTAVSDSVLLLFGG I RGD +GHLKMLGGYLEFFM+PA+AEM
Sbjct: 964  WLVFNEKIKVNSVFLRDSTAVSDSVLLLFGGDILRGDGDGHLKMLGGYLEFFMKPAIAEM 1023

Query: 565  YQSLRRELDELFQCKLMNPRMDLHTHHELLSAVRLLLPEDQHNGRFVFNRQVLYSNSKPY 386
            YQSLRRELDEL Q KL+NPRM +H +HELLSAVRLL+ EDQ +GRFVF+ QV     KP 
Sbjct: 1024 YQSLRRELDELIQNKLLNPRMGIHMYHELLSAVRLLISEDQCDGRFVFSHQVGRQVVKPS 1083

Query: 385  VASV-XXXXPLASRVESGPGGDNSKSQLQTLLTRAGYAAPTYRTNQLSNNQFQSICEFNG 209
              SV      L SR ESGPGGDNSKSQLQTLLTRAGYAAPTY+T QL NNQF+S  EFNG
Sbjct: 1084 KTSVTVMPKALVSRTESGPGGDNSKSQLQTLLTRAGYAAPTYKTKQLKNNQFRSTVEFNG 1143

Query: 208  MQIMGHPCNNXXXXXXXXXXXXXEWLTGGNHAGRVLIDSMSMIL 77
            MQIMG PCNN             + L GG  +G   ID MSM+L
Sbjct: 1144 MQIMGQPCNNKKFAEKDAAAEALQLLMGGTQSGHEYIDHMSMLL 1187


>ref|XP_002315906.1| predicted protein [Populus trichocarpa] gi|222864946|gb|EEF02077.1|
            predicted protein [Populus trichocarpa]
          Length = 1053

 Score =  406 bits (1044), Expect = e-111
 Identities = 204/282 (72%), Positives = 231/282 (81%)
 Frame = -3

Query: 922  NTWSYDENLLRAVICYGLYPGICSVVHNEKSFSLKTMEDGQVLLHSNSVNARDSKIPYPW 743
            N WS+DE+L+RAVIC GLYPGICS+VHNEKSFSLKTMEDGQVLLHSNSVNAR+SKIPYPW
Sbjct: 767  NAWSHDEHLVRAVICSGLYPGICSIVHNEKSFSLKTMEDGQVLLHSNSVNARESKIPYPW 826

Query: 742  LVFNEKIKVNSVFLRDSTAVSDSVLLLFGGTISRGDIEGHLKMLGGYLEFFMEPAVAEMY 563
            LVFNEKIKVNSVFLRDSTAVSDSVLLLFGG+ISRGD +GHLKMLGG+LEF+M+P+VAEMY
Sbjct: 827  LVFNEKIKVNSVFLRDSTAVSDSVLLLFGGSISRGDADGHLKMLGGFLEFYMQPSVAEMY 886

Query: 562  QSLRRELDELFQCKLMNPRMDLHTHHELLSAVRLLLPEDQHNGRFVFNRQVLYSNSKPYV 383
            QSLRRELDEL Q KL+NPRMD+H HHELLSAVRLL+ ED  +GRFVF     + +SKP V
Sbjct: 887  QSLRRELDELIQTKLLNPRMDIHMHHELLSAVRLLVSEDNCDGRFVFGCH-FFKSSKPAV 945

Query: 382  ASVXXXXPLASRVESGPGGDNSKSQLQTLLTRAGYAAPTYRTNQLSNNQFQSICEFNGMQ 203
             +      L SR +SGPGGDNSKSQLQTLLTRAGYAAP+Y+T QL NNQF++  EFNGMQ
Sbjct: 946  FAT--QPTLISRGDSGPGGDNSKSQLQTLLTRAGYAAPSYKTKQLKNNQFRATVEFNGMQ 1003

Query: 202  IMGHPCNNXXXXXXXXXXXXXEWLTGGNHAGRVLIDSMSMIL 77
            IMG PCNN             +WL GG    +  I+ MSM+L
Sbjct: 1004 IMGQPCNNKKSAEKDAAAEALQWLVGGTQTSQEYINHMSMLL 1045


>emb|CAN66462.1| hypothetical protein VITISV_035844 [Vitis vinifera]
          Length = 1180

 Score =  406 bits (1044), Expect = e-111
 Identities = 210/284 (73%), Positives = 227/284 (79%), Gaps = 1/284 (0%)
 Frame = -3

Query: 925  YNTWSYDENLLRAVICYGLYPGICSVVHNEKSFSLKTMEDGQVLLHSNSVNARDSKIPYP 746
            YN WSYDE+L+RAVIC GLYPGICSVV NEKSFSLKTMEDGQVLLHSNSVNAR+ KIPYP
Sbjct: 889  YNAWSYDEHLIRAVICCGLYPGICSVVQNEKSFSLKTMEDGQVLLHSNSVNARECKIPYP 948

Query: 745  WLVFNEKIKVNSVFLRDSTAVSDSVLLLFGGTISRGDIEGHLKMLGGYLEFFMEPAVAEM 566
            WLVFNEKIKVNSVFLRDSTAVSDSVLLLFGG I RGD +GHLKMLGGYLEFFM+PA+AEM
Sbjct: 949  WLVFNEKIKVNSVFLRDSTAVSDSVLLLFGGDILRGDGDGHLKMLGGYLEFFMKPAIAEM 1008

Query: 565  YQSLRRELDELFQCKLMNPRMDLHTHHELLSAVRLLLPEDQHNGRFVFNRQVLYSNSKPY 386
            YQSLRRELDEL Q KL+NPRM +H +HELLSAVRLL+ EDQ +GRFVF+ QV     KP 
Sbjct: 1009 YQSLRRELDELIQNKLLNPRMGIHMYHELLSAVRLLISEDQCDGRFVFSHQVGRQVVKPS 1068

Query: 385  VASV-XXXXPLASRVESGPGGDNSKSQLQTLLTRAGYAAPTYRTNQLSNNQFQSICEFNG 209
              SV      L SR ESGPGGDNSKSQLQTLLTRAGYAAPTY+T QL NNQF+S  EFNG
Sbjct: 1069 KTSVTVMPKALVSRTESGPGGDNSKSQLQTLLTRAGYAAPTYKTKQLKNNQFRSTVEFNG 1128

Query: 208  MQIMGHPCNNXXXXXXXXXXXXXEWLTGGNHAGRVLIDSMSMIL 77
            MQIMG PCNN             + L G   +G   ID MSM+L
Sbjct: 1129 MQIMGQPCNNKKFAEKDAAAEALQLLMGRTRSGHEYIDHMSMLL 1172


>ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223534388|gb|EEF36096.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1172

 Score =  404 bits (1038), Expect = e-110
 Identities = 204/283 (72%), Positives = 231/283 (81%), Gaps = 1/283 (0%)
 Frame = -3

Query: 922  NTWSYDENLLRAVICYGLYPGICSVVHNEKSFSLKTMEDGQVLLHSNSVNARDSKIPYPW 743
            NTWS++E+L+RAVICYGLYPGICSVVHNEKSFSLKTMEDGQVLL+SNSVNAR+SKIPYPW
Sbjct: 886  NTWSHEEHLIRAVICYGLYPGICSVVHNEKSFSLKTMEDGQVLLYSNSVNARESKIPYPW 945

Query: 742  LVFNEKIKVNSVFLRDSTAVSDSVLLLFGGTISRGDIEGHLKMLGGYLEFFMEPAVAEMY 563
            LVFNEKIKVN+VFLRDSTAVSDSVLLLFGG+IS+G+ +GHLKMLGGYLEFFM+P +AEMY
Sbjct: 946  LVFNEKIKVNAVFLRDSTAVSDSVLLLFGGSISKGETDGHLKMLGGYLEFFMKPIIAEMY 1005

Query: 562  QSLRRELDELFQCKLMNPRMDLHTHHELLSAVRLLLPEDQHNGRFVFNRQVLYSNSKPYV 383
            QSLRRELDEL + KL+NPRMDLH +H+LLSA+RLL+ ED  +GRF+F  QVL    KP  
Sbjct: 1006 QSLRRELDELIKTKLLNPRMDLHAYHDLLSAIRLLVSEDPCDGRFIFGCQVL----KPSK 1061

Query: 382  ASV-XXXXPLASRVESGPGGDNSKSQLQTLLTRAGYAAPTYRTNQLSNNQFQSICEFNGM 206
             SV      LASR ESGPGGDNSKSQLQTL+TRAGYAAPTY+T QL N+QF+S  EFNGM
Sbjct: 1062 MSVTPTQGALASRTESGPGGDNSKSQLQTLITRAGYAAPTYKTKQLKNSQFRSTVEFNGM 1121

Query: 205  QIMGHPCNNXXXXXXXXXXXXXEWLTGGNHAGRVLIDSMSMIL 77
            QIMG PCNN              WL G    G   I+ MSM+L
Sbjct: 1122 QIMGQPCNNKKSAEKDAAAEALRWLMGETRTGPEYINHMSMLL 1164


Top