BLASTX nr result

ID: Atractylodes21_contig00037423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037423
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ric...   240   7e-62
ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   236   1e-60
ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   229   2e-58
ref|XP_002318819.1| predicted protein [Populus trichocarpa] gi|2...   226   2e-57
ref|XP_002321910.1| predicted protein [Populus trichocarpa] gi|2...   223   1e-56

>ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
           gi|223531761|gb|EEF33581.1| ubiquitin ligase protein
           cop1, putative [Ricinus communis]
          Length = 426

 Score =  240 bits (613), Expect = 7e-62
 Identities = 105/159 (66%), Positives = 130/159 (81%), Gaps = 5/159 (3%)
 Frame = -3

Query: 463 RRVWSMDYSHWDPVVGASGSDDGTMQMWDPRHDGGKCVATVQLG-----SPVCCVEFSPF 299
           RR+WS+DYSHW PVVGASGSDDGTMQMWDPRH+GG CVATV+         VC VEF+PF
Sbjct: 204 RRIWSVDYSHWSPVVGASGSDDGTMQMWDPRHEGGGCVATVKPSVTSSCRAVCSVEFNPF 263

Query: 298 GGALVAVGCADRKAYAYDVRKIDNPVAVFDGHQRTVSYTRFLDDDRVMTSGTDGCLKMWD 119
           GG+++AVGCADR+ Y YDVR I NPV V DGH++TV+Y RF+D+  + ++G DGCLK+W+
Sbjct: 264 GGSIIAVGCADRRVYGYDVRMITNPVFVLDGHKKTVTYVRFMDNGTLASAGIDGCLKLWN 323

Query: 118 IKDQTLIRTYRGHTNRRRFVGLSVWRNQGLIGCGSESNQ 2
           ++D  L+RTY+GH N R FVGLSVWRN GL+GCGSE+NQ
Sbjct: 324 LQDSQLLRTYKGHLNSRNFVGLSVWRNGGLLGCGSENNQ 362


>ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 383

 Score =  236 bits (603), Expect = 1e-60
 Identities = 107/156 (68%), Positives = 127/156 (81%), Gaps = 3/156 (1%)
 Frame = -3

Query: 463 RRVWSMDYSHWDPVVGASGSDDGTMQMWDPRHDGGKCVATVQL---GSPVCCVEFSPFGG 293
           RR+WS+DYSHWDP VGASGSDDGTMQMWDPR +G K VA V+    GS VCCVEF+PFGG
Sbjct: 162 RRIWSVDYSHWDPFVGASGSDDGTMQMWDPRCEGIKNVAKVRPSGGGSAVCCVEFNPFGG 221

Query: 292 ALVAVGCADRKAYAYDVRKIDNPVAVFDGHQRTVSYTRFLDDDRVMTSGTDGCLKMWDIK 113
            L+AVGCADR+AY YDVRK+ +PV +FDGHQ+TV+Y RFLD   ++TSGTDGCL++W + 
Sbjct: 222 PLIAVGCADRRAYGYDVRKMVDPVLIFDGHQKTVTYVRFLDQHTMVTSGTDGCLRLWSMH 281

Query: 112 DQTLIRTYRGHTNRRRFVGLSVWRNQGLIGCGSESN 5
           D  +IR Y GH N R FVGLSVWR  GL+GCGSE+N
Sbjct: 282 DARMIRVYMGHMNTRSFVGLSVWRTGGLLGCGSENN 317


>ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 382

 Score =  229 bits (584), Expect = 2e-58
 Identities = 103/156 (66%), Positives = 125/156 (80%), Gaps = 3/156 (1%)
 Frame = -3

Query: 463 RRVWSMDYSHWDPVVGASGSDDGTMQMWDPRHDGGKCVATVQL---GSPVCCVEFSPFGG 293
           RR+WS+DYSHW+P VGASGSDDGT+QMWDPR +G   VA V+    G  VCCVEF+PFGG
Sbjct: 162 RRIWSVDYSHWNPFVGASGSDDGTIQMWDPRCEGTTNVAKVRPSAGGGAVCCVEFNPFGG 221

Query: 292 ALVAVGCADRKAYAYDVRKIDNPVAVFDGHQRTVSYTRFLDDDRVMTSGTDGCLKMWDIK 113
            LVAVGCADR+AY YDVRK+ +PV +FDGHQ+ V+Y RFLD+  ++TSGTDGCL++W + 
Sbjct: 222 PLVAVGCADRRAYGYDVRKMVDPVLIFDGHQKPVTYVRFLDEHMMVTSGTDGCLRLWSMH 281

Query: 112 DQTLIRTYRGHTNRRRFVGLSVWRNQGLIGCGSESN 5
           D  +IR Y GH N R FVGLSVWR  GL+GCGSE+N
Sbjct: 282 DARMIRVYMGHMNTRNFVGLSVWRTGGLLGCGSENN 317


>ref|XP_002318819.1| predicted protein [Populus trichocarpa] gi|222859492|gb|EEE97039.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  226 bits (575), Expect = 2e-57
 Identities = 100/157 (63%), Positives = 127/157 (80%), Gaps = 3/157 (1%)
 Frame = -3

Query: 463 RRVWSMDYSHWDPVVGASGSDDGTMQMWDPRHDGGKCVATVQLG---SPVCCVEFSPFGG 293
           RRVWS+DYSHWDPV+GASGSDDGTMQMWD R + G+ VATVQ G   S VCCVEF+PFGG
Sbjct: 20  RRVWSVDYSHWDPVLGASGSDDGTMQMWDTRCESGEGVATVQPGVGRSAVCCVEFNPFGG 79

Query: 292 ALVAVGCADRKAYAYDVRKIDNPVAVFDGHQRTVSYTRFLDDDRVMTSGTDGCLKMWDIK 113
            +VAVGCADR+ Y YD+R   +PV V DGH++TV+Y +FLD+  ++++  DGCLK+WD  
Sbjct: 80  PIVAVGCADRRVYGYDIRMTGDPVFVLDGHRKTVTYIKFLDNVTLVSASIDGCLKLWDSD 139

Query: 112 DQTLIRTYRGHTNRRRFVGLSVWRNQGLIGCGSESNQ 2
           +  +IR+Y+GH N R F+GLSVWRN GL+GCGSE+N+
Sbjct: 140 NSNVIRSYKGHVNSRSFIGLSVWRNGGLLGCGSENNK 176


>ref|XP_002321910.1| predicted protein [Populus trichocarpa] gi|222868906|gb|EEF06037.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  223 bits (568), Expect = 1e-56
 Identities = 99/157 (63%), Positives = 125/157 (79%), Gaps = 3/157 (1%)
 Frame = -3

Query: 463 RRVWSMDYSHWDPVVGASGSDDGTMQMWDPRHDGGKCVATVQLG---SPVCCVEFSPFGG 293
           RRVWS+DYSH DP +GASGSDDGTMQMWD R + G+CVATVQ     S VCCVEF+PFGG
Sbjct: 20  RRVWSVDYSHCDPTMGASGSDDGTMQMWDTRSESGECVATVQPSVRRSAVCCVEFNPFGG 79

Query: 292 ALVAVGCADRKAYAYDVRKIDNPVAVFDGHQRTVSYTRFLDDDRVMTSGTDGCLKMWDIK 113
            +VA+GCADRK Y YD+R + +PV V DGH++TV+Y +FLD+  ++++  DGCLK+W+  
Sbjct: 80  PIVAIGCADRKVYGYDLRMMADPVFVLDGHRKTVTYIKFLDNATLVSASIDGCLKLWNSD 139

Query: 112 DQTLIRTYRGHTNRRRFVGLSVWRNQGLIGCGSESNQ 2
           +  +IRTY GH N R FVGLSVWRN GL+GCGSE+N+
Sbjct: 140 NSNVIRTYHGHVNNRNFVGLSVWRNGGLLGCGSENNK 176


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