BLASTX nr result

ID: Atractylodes21_contig00037407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037407
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268494.2| PREDICTED: zinc finger protein VAR3, chlorop...    72   5e-11
emb|CBI31208.3| unnamed protein product [Vitis vinifera]               72   5e-11
ref|XP_002334129.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_002319199.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_004167549.1| PREDICTED: zinc finger protein VAR3, chlorop...    70   1e-10

>ref|XP_002268494.2| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Vitis
           vinifera]
          Length = 879

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/51 (64%), Positives = 42/51 (82%)
 Frame = -1

Query: 177 QDIDKEEKSERWFEKVKELHGVTGPTSAVLHDDFPQIMPVRKGENRFVDSK 25
           +D ++ EKSERWF+KV ELH VT  +SA+  +DFP+IMP+RKGENRFV SK
Sbjct: 580 EDKEQAEKSERWFKKVAELHDVTDLSSAISDEDFPEIMPMRKGENRFVVSK 630



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/47 (57%), Positives = 34/47 (72%)
 Frame = -1

Query: 168 DKEEKSERWFEKVKELHGVTGPTSAVLHDDFPQIMPVRKGENRFVDS 28
           D EEK+ERWF K+ +L   T   SA+  +DFP+IMP+RKG NRFV S
Sbjct: 366 DNEEKAERWFSKISQLDSTTDMNSAIGDEDFPEIMPLRKGVNRFVVS 412


>emb|CBI31208.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/51 (64%), Positives = 42/51 (82%)
 Frame = -1

Query: 177 QDIDKEEKSERWFEKVKELHGVTGPTSAVLHDDFPQIMPVRKGENRFVDSK 25
           +D ++ EKSERWF+KV ELH VT  +SA+  +DFP+IMP+RKGENRFV SK
Sbjct: 451 EDKEQAEKSERWFKKVAELHDVTDLSSAISDEDFPEIMPMRKGENRFVVSK 501


>ref|XP_002334129.1| predicted protein [Populus trichocarpa] gi|222869692|gb|EEF06823.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/48 (68%), Positives = 39/48 (81%)
 Frame = -1

Query: 168 DKEEKSERWFEKVKELHGVTGPTSAVLHDDFPQIMPVRKGENRFVDSK 25
           D  EKSERWF++V ELH VT  TSA+  DDFP+IMP+RKGEN+FV SK
Sbjct: 550 DVAEKSERWFKRVAELHNVTDLTSAISDDDFPEIMPLRKGENKFVVSK 597


>ref|XP_002319199.1| predicted protein [Populus trichocarpa] gi|222857575|gb|EEE95122.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/48 (68%), Positives = 39/48 (81%)
 Frame = -1

Query: 168 DKEEKSERWFEKVKELHGVTGPTSAVLHDDFPQIMPVRKGENRFVDSK 25
           D  EKSERWF++V ELH VT  TSA+  DDFP+IMP+RKGEN+FV SK
Sbjct: 462 DVAEKSERWFKRVAELHNVTDLTSAISDDDFPEIMPLRKGENKFVVSK 509


>ref|XP_004167549.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Cucumis
           sativus]
          Length = 847

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
 Frame = -1

Query: 234 SEEANESVKAGEYVQSRHTQDI----DKEEKSERWFEKVKELHGVTGPTSAVLHDDFPQI 67
           + ++NE  + G       T+ I    +  EKSERWF++V ELH VT   SA+  +DFP+I
Sbjct: 546 ASQSNEMKEVGGTPPRNETEKIIEGKEDAEKSERWFKRVAELHDVTDLPSAISDEDFPEI 605

Query: 66  MPVRKGENRFVDSK 25
           MP+RKGENRFV SK
Sbjct: 606 MPIRKGENRFVVSK 619



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
 Frame = -1

Query: 222 NESVKAGEYVQSRHTQ-DIDK-----EEKSERWFEKVKELHGVTGPTSAVLHDDFPQIMP 61
           NE+  +G    SR T+ DID      EEK++RWF K+ +L G +  +S++  +DFP+IMP
Sbjct: 338 NENFASGNDNGSRATKVDIDSKLAANEEKAQRWFSKISQLDGTSDSSSSIADEDFPEIMP 397

Query: 60  VRKGENRFVDS 28
           +RKG NRFV S
Sbjct: 398 LRKGVNRFVVS 408


Top