BLASTX nr result

ID: Atractylodes21_contig00037382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037382
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18522.3| unnamed protein product [Vitis vinifera]               92   2e-16
ref|XP_003634559.1| PREDICTED: pentatricopeptide repeat-containi...    80   4e-13
emb|CAN75781.1| hypothetical protein VITISV_012425 [Vitis vinifera]    80   4e-13
ref|XP_002518234.1| pentatricopeptide repeat-containing protein,...    74   4e-11
ref|XP_003547448.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06

>emb|CBI18522.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 46/99 (46%), Positives = 70/99 (70%)
 Frame = -3

Query: 818 DMLQTENIVDLLKKVDTGTETESVDHFLVSLCDQGNIREAVMILDEIVHMFFPVGKKVDE 639
           +MLQT ++++L+ +VDT  ETESV+ F++SLC+QG+I+EAV +L+E+  +FFP+G++   
Sbjct: 694 EMLQTRSVLELINRVDTEIETESVESFIISLCEQGSIQEAVTVLNEVGSIFFPIGRRC-R 752

Query: 638 GKLRVGGSEPLISGHEDDVVYDDFEACYDLLASLCSRGE 522
            + R    E +  G    V   DFE+ Y L+ASLCSRGE
Sbjct: 753 PQNRAEKEEKIYEGKGSRV--PDFESYYSLIASLCSRGE 789


>ref|XP_003634559.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
            mitochondrial-like [Vitis vinifera]
          Length = 993

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 37/136 (27%)
 Frame = -3

Query: 818  DMLQTENIVDLLKKVDTGTETESVDHFLVSLCDQGNIREAVMILDEIVHMFFPVGKK--- 648
            +MLQT ++++L+ +VDT  ETESV+ F++SLC+QG+I+EAV +L+E+  +FFP+G++   
Sbjct: 839  EMLQTRSVLELINRVDTEIETESVESFIISLCEQGSIQEAVTVLNEVGSIFFPIGRRCRP 898

Query: 647  -------------------------------VDEGKLRVGGSEPLISGHEDDVV---YDD 570
                                           +D G   V   E ++  +++        D
Sbjct: 899  QNRAEKEEKIYEGVTFGAVSSKHSSLNHKMDLDVGLSNVKKVEMVVDDYDNSEKGSRVPD 958

Query: 569  FEACYDLLASLCSRGE 522
            FE+ Y L+ASLCSRGE
Sbjct: 959  FESYYSLIASLCSRGE 974


>emb|CAN75781.1| hypothetical protein VITISV_012425 [Vitis vinifera]
          Length = 993

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 37/136 (27%)
 Frame = -3

Query: 818  DMLQTENIVDLLKKVDTGTETESVDHFLVSLCDQGNIREAVMILDEIVHMFFPVGKK--- 648
            +MLQT ++++L+ +VDT  ETESV+ F++SLC+QG+I+EAV +L+E+  +FFP+G++   
Sbjct: 839  EMLQTRSVLELINRVDTEIETESVESFIISLCEQGSIQEAVTVLNEVGSIFFPIGRRCRP 898

Query: 647  -------------------------------VDEGKLRVGGSEPLISGHEDDVV---YDD 570
                                           +D G   V   E ++  +++        D
Sbjct: 899  QNRAEKEEKIYEGVTFGAVSSKHSSLNHKMDLDVGLSNVKKVEMVVDDYDNSEKGSRVPD 958

Query: 569  FEACYDLLASLCSRGE 522
            FE+ Y L+ASLCSRGE
Sbjct: 959  FESYYSLIASLCSRGE 974


>ref|XP_002518234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223542581|gb|EEF44120.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 932

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 44/114 (38%), Positives = 71/114 (62%), Gaps = 15/114 (13%)
 Frame = -3

Query: 818  DMLQTENIVDLLKKVDTGTETESVDHFLVSLCDQGNIREAVMILDEIVHMFFPVGK--KV 645
            +MLQ++++++LL KV+T  ETES++ FL+ LC++G+I+EAV +L+EI  +FFPV K    
Sbjct: 800  EMLQSQSVMELLNKVNTEVETESIESFLLFLCEKGSIKEAVAVLNEIGSLFFPVQKWSSP 859

Query: 644  DEGKLRVGGSEPLIS---GHEDDVV----------YDDFEACYDLLASLCSRGE 522
             E +     +  L S      D+VV          ++ F + Y ++ASLCS+GE
Sbjct: 860  SESQSLQSANLSLASCDATEVDEVVETSDDLGESKFNCFASYYSVIASLCSKGE 913


>ref|XP_003547448.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
            mitochondrial-like [Glycine max]
          Length = 1064

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 26/54 (48%), Positives = 42/54 (77%)
 Frame = -3

Query: 818  DMLQTENIVDLLKKVDTGTETESVDHFLVSLCDQGNIREAVMILDEIVHMFFPV 657
            +MLQ++N+V+L+  V+   +TES+  FL +LC+QG ++EAV +L+EIV + FPV
Sbjct: 910  EMLQSKNVVELINIVNKEVDTESISDFLGTLCEQGRVQEAVTVLNEIVCILFPV 963


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