BLASTX nr result

ID: Atractylodes21_contig00037380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037380
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264821.2| PREDICTED: ubiquinol-cytochrome c reductase ...    63   2e-08
emb|CBI38626.3| unnamed protein product [Vitis vinifera]               63   2e-08
ref|XP_002332696.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
gb|ABK96392.1| unknown [Populus trichocarpa x Populus deltoides]       60   2e-07
dbj|BAC80068.1| unknown protein [Oryza sativa Japonica Group] gi...    60   2e-07

>ref|XP_002264821.2| PREDICTED: ubiquinol-cytochrome c reductase complex chaperone CBP3
           homolog [Vitis vinifera]
          Length = 285

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = -3

Query: 235 ALPAVLAFSRYVRRECTCLSLTDKESMFSGNFMFTPLENPNA 110
           A  AV A +RY RREC+CLSLTDKES+FSGNF F+ LENP +
Sbjct: 239 AAGAVQAMARYARRECSCLSLTDKESIFSGNFTFSSLENPKS 280


>emb|CBI38626.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = -3

Query: 235 ALPAVLAFSRYVRRECTCLSLTDKESMFSGNFMFTPLENPNA 110
           A  AV A +RY RREC+CLSLTDKES+FSGNF F+ LENP +
Sbjct: 308 AAGAVQAMARYARRECSCLSLTDKESIFSGNFTFSSLENPKS 349


>ref|XP_002332696.1| predicted protein [Populus trichocarpa] gi|222832950|gb|EEE71427.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = -3

Query: 235 ALPAVLAFSRYVRRECTCLSLTDKESMFSGNFMFTPLEN 119
           A  A+ A +RYVR E +CLSLTDKE+MFSGNFMFT LEN
Sbjct: 179 ASQAIQAMARYVRHEASCLSLTDKEAMFSGNFMFTSLEN 217


>gb|ABK96392.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 291

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = -3

Query: 235 ALPAVLAFSRYVRRECTCLSLTDKESMFSGNFMFTPLEN 119
           A  A+ A +RYVR E +CLSLTDKE+MFSGNFMFT LEN
Sbjct: 246 ASQAIQAMARYVRHEASCLSLTDKEAMFSGNFMFTSLEN 284


>dbj|BAC80068.1| unknown protein [Oryza sativa Japonica Group]
           gi|215686978|dbj|BAG90848.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218199632|gb|EEC82059.1| hypothetical protein
           OsI_26046 [Oryza sativa Indica Group]
          Length = 302

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = -3

Query: 235 ALPAVLAFSRYVRRECTCLSLTDKESMFSGNFMFTPL 125
           A+PA+ A +RY RRE TCLSLTDKE+MFSGNF FT L
Sbjct: 254 AVPAIQALARYTRREATCLSLTDKEAMFSGNFKFTAL 290


Top