BLASTX nr result

ID: Atractylodes21_contig00037366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037366
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538312.1| PREDICTED: pentatricopeptide repeat-containi...    85   5e-15
emb|CBI15914.3| unnamed protein product [Vitis vinifera]               85   5e-15
ref|XP_002278434.1| PREDICTED: pentatricopeptide repeat-containi...    85   5e-15
ref|XP_003551233.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_002313976.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14

>ref|XP_003538312.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
           chloroplastic-like [Glycine max]
          Length = 510

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/90 (51%), Positives = 55/90 (61%)
 Frame = -3

Query: 291 QKGVIAISRLFTRMEVXXXXXXXXXXXXXXKGCIKGSHNEGVAEAENKILDLGMYPEFRD 112
           QK   A +RL TR+EV              +G IKG H    AE   K+LDLG YPE+ D
Sbjct: 397 QKESNATARLLTRLEVASSPQKKKSLSWLLRGYIKGGHFNEAAETIMKMLDLGFYPEYLD 456

Query: 111 RAAVLQGLRKGIHQLGNMEAYLKLCKCLSD 22
           RAAVLQGLRK I Q GN++ Y++LCK LSD
Sbjct: 457 RAAVLQGLRKRIQQYGNLDTYVRLCKSLSD 486


>emb|CBI15914.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/90 (53%), Positives = 56/90 (62%)
 Frame = -3

Query: 291 QKGVIAISRLFTRMEVXXXXXXXXXXXXXXKGCIKGSHNEGVAEAENKILDLGMYPEFRD 112
           +K   AISRL T MEV              +G IKGSH +  +E   K+LDLG+ PE+ D
Sbjct: 255 KKEASAISRLLTGMEVTSSIRRKKTLSWLLRGYIKGSHFDDASETIIKMLDLGLCPEYLD 314

Query: 111 RAAVLQGLRKGIHQLGNMEAYLKLCKCLSD 22
           RAAVLQGLR  I Q GN+E YLKLCK LSD
Sbjct: 315 RAAVLQGLRNRIQQTGNVETYLKLCKHLSD 344


>ref|XP_002278434.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
           chloroplastic [Vitis vinifera]
          Length = 511

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/90 (53%), Positives = 56/90 (62%)
 Frame = -3

Query: 291 QKGVIAISRLFTRMEVXXXXXXXXXXXXXXKGCIKGSHNEGVAEAENKILDLGMYPEFRD 112
           +K   AISRL T MEV              +G IKGSH +  +E   K+LDLG+ PE+ D
Sbjct: 398 KKEASAISRLLTGMEVTSSIRRKKTLSWLLRGYIKGSHFDDASETIIKMLDLGLCPEYLD 457

Query: 111 RAAVLQGLRKGIHQLGNMEAYLKLCKCLSD 22
           RAAVLQGLR  I Q GN+E YLKLCK LSD
Sbjct: 458 RAAVLQGLRNRIQQTGNVETYLKLCKHLSD 487


>ref|XP_003551233.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
           chloroplastic-like [Glycine max]
          Length = 508

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 45/90 (50%), Positives = 55/90 (61%)
 Frame = -3

Query: 291 QKGVIAISRLFTRMEVXXXXXXXXXXXXXXKGCIKGSHNEGVAEAENKILDLGMYPEFRD 112
           QK   A +RL TR+EV              +G IKG H    AE   K+L+LG YPE+ D
Sbjct: 395 QKESNATARLLTRLEVVSSPQKKKSLSWLLRGYIKGGHFNEAAETIMKMLELGFYPEYLD 454

Query: 111 RAAVLQGLRKGIHQLGNMEAYLKLCKCLSD 22
           RAAVLQGLRK I Q GN++ Y++LCK LSD
Sbjct: 455 RAAVLQGLRKRIQQYGNLDTYVRLCKSLSD 484


>ref|XP_002313976.1| predicted protein [Populus trichocarpa] gi|222850384|gb|EEE87931.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/90 (50%), Positives = 56/90 (62%)
 Frame = -3

Query: 291 QKGVIAISRLFTRMEVXXXXXXXXXXXXXXKGCIKGSHNEGVAEAENKILDLGMYPEFRD 112
           QK   A++RL TR+EV              +G IKG H    AE   K+LDLG+ P++ D
Sbjct: 387 QKEASAVARLLTRIEVASSMRKKKSLSWLLRGYIKGGHYGEAAETLIKMLDLGLSPDYLD 446

Query: 111 RAAVLQGLRKGIHQLGNMEAYLKLCKCLSD 22
           R AV+QGLRK I Q GN+E+YLKLCK LSD
Sbjct: 447 RVAVMQGLRKRIQQWGNVESYLKLCKRLSD 476


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