BLASTX nr result

ID: Atractylodes21_contig00037356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037356
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25159.3| unnamed protein product [Vitis vinifera]              131   6e-29
ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containi...   131   6e-29
ref|XP_002528752.1| pentatricopeptide repeat-containing protein,...   129   2e-28
emb|CAN78364.1| hypothetical protein VITISV_028668 [Vitis vinifera]   126   2e-27
emb|CBI20033.3| unnamed protein product [Vitis vinifera]              125   3e-27

>emb|CBI25159.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/99 (63%), Positives = 78/99 (78%)
 Frame = +3

Query: 9   SSVTCDILVDGLTKEGKLLEACDLLLDFSRKGVLPTKFDYFGLIERLCDKGDVVKAGLIV 188
           S+VTC+ILVDGL +EG++LEACDLL+DFS KG LP  FDYF LIE LC + +V +A  ++
Sbjct: 359 SNVTCEILVDGLCREGRVLEACDLLIDFSGKGALPNGFDYFCLIEALCGEENVDRALELL 418

Query: 189 DEVWEKGNPPSSITCTILIEGLRRVRNTEAALKLMDKML 305
           D++W KGN PSSI CT  IEGLRR R TE A +LM+KML
Sbjct: 419 DQLWRKGNAPSSIACTAFIEGLRRFRKTEEAFQLMEKML 457


>ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36240-like [Vitis vinifera]
          Length = 588

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/99 (63%), Positives = 78/99 (78%)
 Frame = +3

Query: 9   SSVTCDILVDGLTKEGKLLEACDLLLDFSRKGVLPTKFDYFGLIERLCDKGDVVKAGLIV 188
           S+VTC+ILVDGL +EG++LEACDLL+DFS KG LP  FDYF LIE LC + +V +A  ++
Sbjct: 392 SNVTCEILVDGLCREGRVLEACDLLIDFSGKGALPNGFDYFCLIEALCGEENVDRALELL 451

Query: 189 DEVWEKGNPPSSITCTILIEGLRRVRNTEAALKLMDKML 305
           D++W KGN PSSI CT  IEGLRR R TE A +LM+KML
Sbjct: 452 DQLWRKGNAPSSIACTAFIEGLRRFRKTEEAFQLMEKML 490


>ref|XP_002528752.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531846|gb|EEF33664.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 371

 Score =  129 bits (324), Expect = 2e-28
 Identities = 59/99 (59%), Positives = 81/99 (81%)
 Frame = +3

Query: 9   SSVTCDILVDGLTKEGKLLEACDLLLDFSRKGVLPTKFDYFGLIERLCDKGDVVKAGLIV 188
           SSVTC+ILVDGL++E K+LEAC+LL+DFSRKG+LP KFD+ GL+++LC+K +V  A  ++
Sbjct: 169 SSVTCEILVDGLSRENKVLEACNLLIDFSRKGILPCKFDFCGLVDKLCEKKNVDAALYLL 228

Query: 189 DEVWEKGNPPSSITCTILIEGLRRVRNTEAALKLMDKML 305
           DE+W  GN PS I+CT LIEGLR++   E + KLM++ML
Sbjct: 229 DELWRNGNVPSLISCTTLIEGLRKMGKREESFKLMERML 267


>emb|CAN78364.1| hypothetical protein VITISV_028668 [Vitis vinifera]
          Length = 488

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/99 (62%), Positives = 77/99 (77%)
 Frame = +3

Query: 9   SSVTCDILVDGLTKEGKLLEACDLLLDFSRKGVLPTKFDYFGLIERLCDKGDVVKAGLIV 188
           S+VTC+ILVDGL +EG++LEACDLL+ FS KG LP  FDYF LIE LC + +V +A  ++
Sbjct: 189 SNVTCEILVDGLCREGRVLEACDLLIYFSGKGALPNGFDYFCLIEALCGEENVDRALELL 248

Query: 189 DEVWEKGNPPSSITCTILIEGLRRVRNTEAALKLMDKML 305
           D++W KGN PSSI CT LIEGLRR   TE A +LM+KML
Sbjct: 249 DQLWRKGNAPSSIACTTLIEGLRRFGKTEEAFQLMEKML 287


>emb|CBI20033.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  125 bits (315), Expect = 3e-27
 Identities = 62/99 (62%), Positives = 77/99 (77%)
 Frame = +3

Query: 9   SSVTCDILVDGLTKEGKLLEACDLLLDFSRKGVLPTKFDYFGLIERLCDKGDVVKAGLIV 188
           S+VTC+ILVDGL +EG++LEA DLL+DFS KG LP  FDYF LIE LC + +V +A  ++
Sbjct: 285 SNVTCEILVDGLCREGRVLEAFDLLIDFSGKGALPNGFDYFCLIEALCGEENVDRALELL 344

Query: 189 DEVWEKGNPPSSITCTILIEGLRRVRNTEAALKLMDKML 305
           D++W KGN PSSI CT LIEGLRR   TE A +LM+KML
Sbjct: 345 DQLWRKGNAPSSIACTTLIEGLRRFGKTEEAFQLMEKML 383


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