BLASTX nr result

ID: Atractylodes21_contig00037326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037326
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171846.1| PREDICTED: uncharacterized protein LOC101226...   190   1e-46
gb|ABA97288.1| retrotransposon protein, putative, Ty1-copia subc...   189   2e-46
ref|NP_001044989.1| Os01g0879800 [Oryza sativa Japonica Group] g...   189   2e-46
ref|NP_001150961.1| retrotransposon protein [Zea mays] gi|195643...   182   3e-44
gb|ABA96315.1| retrotransposon protein, putative, Ty1-copia subc...   175   4e-42

>ref|XP_004171846.1| PREDICTED: uncharacterized protein LOC101226793 [Cucumis sativus]
          Length = 407

 Score =  190 bits (482), Expect = 1e-46
 Identities = 89/140 (63%), Positives = 113/140 (80%)
 Frame = -2

Query: 420 PMLTPTNYTTWAIKMEAIMDAQGIWESIEPPAGVAVDEKKNKSARAFIFQAVPEDILLQV 241
           PMLTP NYT W IK EAI++AQG+WE+IEP  G  VD KK+K ARA+I Q +PED+LLQ+
Sbjct: 6   PMLTPHNYTVWTIKAEAILNAQGVWEAIEPARGAEVDVKKDKKARAYILQCIPEDVLLQI 65

Query: 240 SKKRTAKEIWEALKMRYLGADRVQKARLHTLKSDFEALRMKDGETIDDFAGKLSGMVSKY 61
           +KK+TAKEIW++LK RYLG++RV+ AR+ TLKS+F  LRMK+ ETID+F GK+SG+ SK+
Sbjct: 66  AKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETIDEFVGKISGLASKF 125

Query: 60  NSLGATLEDCILVRKLLDSV 1
            +L   LED  LV KLLDSV
Sbjct: 126 TTLRVALEDSSLVNKLLDSV 145


>gb|ABA97288.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
           [Oryza sativa Japonica Group]
          Length = 904

 Score =  189 bits (481), Expect = 2e-46
 Identities = 91/140 (65%), Positives = 118/140 (84%)
 Frame = -2

Query: 420 PMLTPTNYTTWAIKMEAIMDAQGIWESIEPPAGVAVDEKKNKSARAFIFQAVPEDILLQV 241
           P+LT TNY+TWAIKMEA M+AQGIW++IEP A  AVD KK+K ARA +F AVPED+L Q+
Sbjct: 444 PVLTSTNYSTWAIKMEANMEAQGIWDAIEPAADEAVDIKKDKQARACLFGAVPEDVLQQI 503

Query: 240 SKKRTAKEIWEALKMRYLGADRVQKARLHTLKSDFEALRMKDGETIDDFAGKLSGMVSKY 61
           +KK+TAKE+WE+LK R+LG +RV+KAR+ TLKSDF+AL MKD E+ID+FAGK+SG+ +K 
Sbjct: 504 AKKKTAKEVWESLKTRFLGVERVKKARVQTLKSDFKALHMKDTESIDEFAGKISGLANKL 563

Query: 60  NSLGATLEDCILVRKLLDSV 1
           + LG T++D   V+KLLDSV
Sbjct: 564 SDLGVTMDDDEQVKKLLDSV 583


>ref|NP_001044989.1| Os01g0879800 [Oryza sativa Japonica Group]
           gi|113534520|dbj|BAF06903.1| Os01g0879800 [Oryza sativa
           Japonica Group]
          Length = 278

 Score =  189 bits (481), Expect = 2e-46
 Identities = 91/140 (65%), Positives = 118/140 (84%)
 Frame = -2

Query: 420 PMLTPTNYTTWAIKMEAIMDAQGIWESIEPPAGVAVDEKKNKSARAFIFQAVPEDILLQV 241
           P+LT TNY+TWAIKMEA M+AQGIW++IEP A  AVD KK+K ARA +F AVPED+L Q+
Sbjct: 31  PVLTSTNYSTWAIKMEANMEAQGIWDAIEPAADEAVDIKKDKQARACLFGAVPEDVLQQI 90

Query: 240 SKKRTAKEIWEALKMRYLGADRVQKARLHTLKSDFEALRMKDGETIDDFAGKLSGMVSKY 61
           +KK+TAKE+WE+LK R+LG +RV+KAR+ TLKSDF+AL MKD E+ID+FAGK+SG+ +K 
Sbjct: 91  AKKKTAKEVWESLKTRFLGVERVKKARVQTLKSDFKALHMKDTESIDEFAGKISGLANKL 150

Query: 60  NSLGATLEDCILVRKLLDSV 1
           + LG T++D   V+KLLDSV
Sbjct: 151 SDLGVTMDDDEQVKKLLDSV 170


>ref|NP_001150961.1| retrotransposon protein [Zea mays] gi|195643232|gb|ACG41084.1|
           retrotransposon protein [Zea mays]
          Length = 262

 Score =  182 bits (461), Expect = 3e-44
 Identities = 84/140 (60%), Positives = 114/140 (81%)
 Frame = -2

Query: 420 PMLTPTNYTTWAIKMEAIMDAQGIWESIEPPAGVAVDEKKNKSARAFIFQAVPEDILLQV 241
           P+L P +YT WAIK+EA +DAQG+WE++ P AG  VD +K+K+ARA + QA+PEDILLQV
Sbjct: 18  PVLVPASYTAWAIKVEANLDAQGLWEAVAPAAGTTVDVQKSKTARAVLLQALPEDILLQV 77

Query: 240 SKKRTAKEIWEALKMRYLGADRVQKARLHTLKSDFEALRMKDGETIDDFAGKLSGMVSKY 61
           S K TAKE+W++LK RY+GADRV+ ARL TLK +F+ L M+DGE +D +AGK+ GM ++Y
Sbjct: 78  SSKLTAKEVWDSLKSRYVGADRVKSARLATLKGEFDRLFMEDGEALDVYAGKIGGMAARY 137

Query: 60  NSLGATLEDCILVRKLLDSV 1
            +LGATL+D  +V+KLLD+V
Sbjct: 138 IALGATLDDATMVKKLLDTV 157


>gb|ABA96315.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 271

 Score =  175 bits (443), Expect = 4e-42
 Identities = 86/140 (61%), Positives = 113/140 (80%)
 Frame = -2

Query: 420 PMLTPTNYTTWAIKMEAIMDAQGIWESIEPPAGVAVDEKKNKSARAFIFQAVPEDILLQV 241
           PMLT TNY+TWAIKMEA M+AQGIW++IE  A   V++KK+K A A +F AVP+++L Q+
Sbjct: 22  PMLTSTNYSTWAIKMEANMEAQGIWDAIESAADDVVEKKKDKMALACLFGAVPDEVLQQI 81

Query: 240 SKKRTAKEIWEALKMRYLGADRVQKARLHTLKSDFEALRMKDGETIDDFAGKLSGMVSKY 61
           + K+TAKE WE+LK R+LG DRV+KAR+ TLKS+F+AL MK  ETID+FAGK+SG+ +  
Sbjct: 82  ANKKTAKEAWESLKTRFLGVDRVKKARVQTLKSEFKALCMKKTETIDEFAGKISGLANAM 141

Query: 60  NSLGATLEDCILVRKLLDSV 1
           + LGAT+ D  LV+KLLDSV
Sbjct: 142 SGLGATMTDDELVKKLLDSV 161


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