BLASTX nr result

ID: Atractylodes21_contig00037318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037318
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding pr...   164   9e-39
emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]   159   2e-37
ref|XP_002519416.1| polyadenylate-binding protein, putative [Ric...   150   8e-35
ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding pr...   148   5e-34
ref|XP_003625734.1| Polyadenylate binding protein [Medicago trun...   146   1e-33

>ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
           vinifera] gi|297740018|emb|CBI30200.3| unnamed protein
           product [Vitis vinifera]
          Length = 634

 Score =  164 bits (414), Expect = 9e-39
 Identities = 77/96 (80%), Positives = 88/96 (91%)
 Frame = -3

Query: 289 SLYVGDLHPQIDDLQLSNAFSEYKSLSSVRVCRDSSTGRSLCYGYVNFLSPQDAIHAIES 110
           SLYVGDLHP I D  L +AFSE+KSL+SVR+CRDSS+GRSLCYGYVNF+SPQDA HAIE+
Sbjct: 13  SLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASHAIEA 72

Query: 109 KNNTMLYGKMIRVTWSHRDPDVRRSGIGNVFVKNLN 2
           KN+TML+GK+IRV WSHRDPD RRSGIGNVFVKNL+
Sbjct: 73  KNHTMLHGKVIRVMWSHRDPDARRSGIGNVFVKNLS 108


>emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]
          Length = 544

 Score =  159 bits (403), Expect = 2e-37
 Identities = 75/93 (80%), Positives = 85/93 (91%)
 Frame = -3

Query: 289 SLYVGDLHPQIDDLQLSNAFSEYKSLSSVRVCRDSSTGRSLCYGYVNFLSPQDAIHAIES 110
           SLYVGDLHP I D  L +AFSE+KSL+SVR+CRDSS+GRSLCYGYVNF+SPQDA HAIE+
Sbjct: 13  SLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASHAIEA 72

Query: 109 KNNTMLYGKMIRVTWSHRDPDVRRSGIGNVFVK 11
           KN+TML+GK+IRV WSHRDPD RRSGIGNVFVK
Sbjct: 73  KNHTMLHGKVIRVMWSHRDPDARRSGIGNVFVK 105


>ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223541279|gb|EEF42830.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 632

 Score =  150 bits (380), Expect = 8e-35
 Identities = 70/96 (72%), Positives = 85/96 (88%)
 Frame = -3

Query: 289 SLYVGDLHPQIDDLQLSNAFSEYKSLSSVRVCRDSSTGRSLCYGYVNFLSPQDAIHAIES 110
           SLYVG+LH  + D QL +AFSE+ +L+SVRVCRDSSTGRSLCYGYVNF+SP+DAI AIE+
Sbjct: 14  SLYVGELHCDVSDGQLVDAFSEFNTLASVRVCRDSSTGRSLCYGYVNFISPEDAIRAIET 73

Query: 109 KNNTMLYGKMIRVTWSHRDPDVRRSGIGNVFVKNLN 2
           KN+T L GK++RV WSHRDPD RR+GIGNV+VKNL+
Sbjct: 74  KNHTPLNGKLMRVMWSHRDPDARRNGIGNVYVKNLS 109


>ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Glycine max]
          Length = 636

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/95 (72%), Positives = 81/95 (85%)
 Frame = -3

Query: 289 SLYVGDLHPQIDDLQLSNAFSEYKSLSSVRVCRDSSTGRSLCYGYVNFLSPQDAIHAIES 110
           SLYVGDLHP + D  L +AFSE+KSL+SVRVC+DSSTG+SLCYGY+NF+SPQDAI AIE 
Sbjct: 13  SLYVGDLHPDVSDSHLVDAFSEFKSLASVRVCKDSSTGKSLCYGYLNFVSPQDAIRAIEL 72

Query: 109 KNNTMLYGKMIRVTWSHRDPDVRRSGIGNVFVKNL 5
           KNN+ L GK +RV WS RDPD R+S IGN+FVKNL
Sbjct: 73  KNNSTLNGKAMRVMWSRRDPDARKSAIGNLFVKNL 107


>ref|XP_003625734.1| Polyadenylate binding protein [Medicago truncatula]
           gi|355500749|gb|AES81952.1| Polyadenylate binding
           protein [Medicago truncatula]
          Length = 613

 Score =  146 bits (369), Expect = 1e-33
 Identities = 69/95 (72%), Positives = 81/95 (85%)
 Frame = -3

Query: 289 SLYVGDLHPQIDDLQLSNAFSEYKSLSSVRVCRDSSTGRSLCYGYVNFLSPQDAIHAIES 110
           SLYVGDLHP + D QL +AFS++K+L+SVR+CRDSS+G+SLCYGYVNFLSP DAI AIE 
Sbjct: 11  SLYVGDLHPDLSDSQLHDAFSDFKTLASVRICRDSSSGKSLCYGYVNFLSPHDAIRAIEV 70

Query: 109 KNNTMLYGKMIRVTWSHRDPDVRRSGIGNVFVKNL 5
           KN++ L GK IRV WS RDPD R+S IGNVFVKNL
Sbjct: 71  KNHSTLNGKAIRVMWSRRDPDARKSCIGNVFVKNL 105


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