BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037281
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD24647.1| putative retroelement pol polyprotein [Arabidopsi...    89   4e-16
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...    85   7e-15
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...    82   3e-14
gb|ACB28472.1| polyprotein [Ananas comosus]                            76   3e-12
emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]    75   5e-12

>gb|AAD24647.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 780

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/98 (45%), Positives = 66/98 (67%), Gaps = 13/98 (13%)
 Frame = +2

Query: 2   VIVVQKWEQYLCGQIFLIRTNQKSLKWLLQQKISTP-------------YKVHYKKGSDN 142
           + VV+KW  YL    F+I+T+Q+SLK+LL+Q+++TP             Y++ YK+G +N
Sbjct: 334 IFVVRKWRHYLISSHFIIKTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYKQGKEN 393

Query: 143 LVADALSRVSGSKMLCMAISVIDSNLSSLIQASYSLAG 256
           LVADALSRV GS++L MA+SV++ +L   IQA Y   G
Sbjct: 394 LVADALSRVEGSEVLHMALSVVECDLLKEIQAGYVTDG 431


>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/102 (40%), Positives = 66/102 (64%), Gaps = 13/102 (12%)
 Frame = +2

Query: 2    VIVVQKWEQYLCGQIFLIRTNQKSLKWLLQQKISTP-------------YKVHYKKGSDN 142
            +  V+KW  YL    F+I+T+Q+SLK+LL+Q+++TP             Y++ Y++G +N
Sbjct: 914  IFAVRKWRHYLLPSHFIIKTDQRSLKYLLEQRLNTPVQQQWLPKLLEFDYEIQYRQGKEN 973

Query: 143  LVADALSRVSGSKMLCMAISVIDSNLSSLIQASYSLAGAAKN 268
            LVADALSRV GS++L MA+S+++ +    IQ +Y   G  K+
Sbjct: 974  LVADALSRVEGSEVLHMALSIVECDFLKEIQVAYESDGVLKD 1015


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/95 (42%), Positives = 65/95 (68%), Gaps = 13/95 (13%)
 Frame = +2

Query: 2    VIVVQKWEQYLCGQIFLIRTNQKSLKWLLQQKISTP-------------YKVHYKKGSDN 142
            +  V+KW  YL    F+I+T+Q+SLK+LL+Q+++TP             Y++ Y++G +N
Sbjct: 943  IFAVRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQGKEN 1002

Query: 143  LVADALSRVSGSKMLCMAISVIDSNLSSLIQASYS 247
            +VADALSRV GS++L MA++V++ +L   IQA Y+
Sbjct: 1003 VVADALSRVEGSEVLHMAMTVVECDLLKDIQAGYA 1037


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 51/140 (36%), Positives = 76/140 (54%), Gaps = 20/140 (14%)
 Frame = +2

Query: 2   VIVVQKWEQYLCGQIFLIRTNQKSLKWLLQQKISTP-------------YKVHYKKGSDN 142
           VI VQKW  YL G+ F I+T+ +SLK+L++Q++STP             Y++ YKKG +N
Sbjct: 571 VIAVQKWRPYLIGRHFKIKTDHQSLKYLMEQRVSTPSQQKWVAKLMGYDYELIYKKGQEN 630

Query: 143 LVADALSRVSGSKMLCMAISVIDSNLSSLIQASYSLAGAAKNSAGLPGSTLYGG**FA-- 316
           +VADALSR        +A+S I ++L   I+ S+++    K       S +     +   
Sbjct: 631 VVADALSR----SPTLLAVSAIHTDLLDQIKWSWNVDDKLKKIIQQKQSDINSWPRYTWV 686

Query: 317 -----RKGKILVGPDDSLKL 361
                RKGK++VG D  LKL
Sbjct: 687 QDQLRRKGKLVVGSDPGLKL 706


>emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
          Length = 1412

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 40/139 (28%), Positives = 80/139 (57%), Gaps = 20/139 (14%)
 Frame = +2

Query: 2    VIVVQKWEQYLCGQIFLIRTNQKSLKWLLQQKISTP-------------YKVHYKKGSDN 142
            ++ ++KWE YL  + F+I+T+ +SLK+LL+Q+++TP             Y++ YK+G +N
Sbjct: 904  LMAIKKWESYLVDRHFVIKTDHQSLKYLLEQRVTTPTQQAWVAKLMQYDYEISYKQGKEN 963

Query: 143  LVADALSRVSGSKMLCMAISVIDSNLSSLIQASY-------SLAGAAKNSAGLPGSTLYG 301
            + ADALSR+  +++  ++ +++++ L  LI+ S+        +  A +          + 
Sbjct: 964  VAADALSRIQPAELFVLSTTILNTQLYDLIKESWGVDPELQKIIKAKEADPSAYPKYSWR 1023

Query: 302  G**FARKGKILVGPDDSLK 358
            G    RKGK++VG ++ L+
Sbjct: 1024 GEELRRKGKLVVGVNEQLR 1042