BLASTX nr result

ID: Atractylodes21_contig00037251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037251
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543076.1| PREDICTED: katanin p80 WD40 repeat-containin...   134   8e-30
ref|XP_003545861.1| PREDICTED: katanin p80 WD40 repeat-containin...   134   1e-29
ref|NP_001185277.1| transducin/WD-40 repeat-containing protein [...   129   3e-28
ref|NP_176316.4| transducin/WD-40 repeat-containing protein [Ara...   129   3e-28
ref|XP_004146637.1| PREDICTED: katanin p80 WD40 repeat-containin...   126   2e-27

>ref|XP_003543076.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 824

 Score =  134 bits (337), Expect = 8e-30
 Identities = 66/91 (72%), Positives = 72/91 (79%)
 Frame = +2

Query: 239 MAKRGYKLQEFVAHSANVNCIKIGKKTRRHFITGGDDEIVNLWSIGKPTCITSLSGHTSP 418
           MAKRGYK+QEFVAHSA+VNC+ IGKK  R FITGGDD  VNLW+IGKPT ITSLSGHTSP
Sbjct: 1   MAKRGYKIQEFVAHSASVNCLNIGKKACRLFITGGDDHKVNLWTIGKPTPITSLSGHTSP 60

Query: 419 IESVAFDSTEVLXXXXXXXXXXKIWDLEETK 511
           +ESVAFDS EVL          K+WDLEE K
Sbjct: 61  VESVAFDSGEVLVLGGASTGVIKLWDLEEAK 91


>ref|XP_003545861.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 825

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/91 (71%), Positives = 72/91 (79%)
 Frame = +2

Query: 239 MAKRGYKLQEFVAHSANVNCIKIGKKTRRHFITGGDDEIVNLWSIGKPTCITSLSGHTSP 418
           MAKRGYK+QEFVAHSA+VNC+ IGKK  R FITGGDD  VNLW+IGKPT +TSLSGHTSP
Sbjct: 1   MAKRGYKIQEFVAHSASVNCLNIGKKACRLFITGGDDHKVNLWTIGKPTFLTSLSGHTSP 60

Query: 419 IESVAFDSTEVLXXXXXXXXXXKIWDLEETK 511
           +ESVAFDS EVL          K+WDLEE K
Sbjct: 61  VESVAFDSGEVLVLGGASTGVIKLWDLEEAK 91


>ref|NP_001185277.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
           gi|332195683|gb|AEE33804.1| transducin/WD-40
           repeat-containing protein [Arabidopsis thaliana]
          Length = 1179

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/91 (68%), Positives = 70/91 (76%)
 Frame = +2

Query: 239 MAKRGYKLQEFVAHSANVNCIKIGKKTRRHFITGGDDEIVNLWSIGKPTCITSLSGHTSP 418
           MAKRGYKLQEF+AHSANVNC+ IGKKT R FITGGDD  VNLW+IGKPT + SL GHTS 
Sbjct: 1   MAKRGYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSA 60

Query: 419 IESVAFDSTEVLXXXXXXXXXXKIWDLEETK 511
           ++SVAFDS EVL          K+WD+EE K
Sbjct: 61  VDSVAFDSAEVLVLAGASSGVIKLWDVEEAK 91


>ref|NP_176316.4| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
           gi|332195682|gb|AEE33803.1| transducin/WD-40
           repeat-containing protein [Arabidopsis thaliana]
          Length = 1181

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/91 (68%), Positives = 70/91 (76%)
 Frame = +2

Query: 239 MAKRGYKLQEFVAHSANVNCIKIGKKTRRHFITGGDDEIVNLWSIGKPTCITSLSGHTSP 418
           MAKRGYKLQEF+AHSANVNC+ IGKKT R FITGGDD  VNLW+IGKPT + SL GHTS 
Sbjct: 1   MAKRGYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSA 60

Query: 419 IESVAFDSTEVLXXXXXXXXXXKIWDLEETK 511
           ++SVAFDS EVL          K+WD+EE K
Sbjct: 61  VDSVAFDSAEVLVLAGASSGVIKLWDVEEAK 91


>ref|XP_004146637.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           [Cucumis sativus]
          Length = 922

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/91 (67%), Positives = 67/91 (73%)
 Frame = +2

Query: 239 MAKRGYKLQEFVAHSANVNCIKIGKKTRRHFITGGDDEIVNLWSIGKPTCITSLSGHTSP 418
           MAKRGYKLQEF AHS NVNC+ IGKK  R FITGGDD  VNLW+IGKP  + SL GHT+P
Sbjct: 1   MAKRGYKLQEFAAHSGNVNCLSIGKKACRLFITGGDDYKVNLWAIGKPNSLMSLCGHTNP 60

Query: 419 IESVAFDSTEVLXXXXXXXXXXKIWDLEETK 511
           +ESVAFDS EVL          K+WDLEE K
Sbjct: 61  VESVAFDSAEVLVLAGASSGAIKLWDLEEAK 91


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