BLASTX nr result

ID: Atractylodes21_contig00037250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037250
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249...   100   2e-19
emb|CBI18100.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_003623391.1| Integrator complex subunit [Medicago truncat...    60   2e-07
ref|XP_002526688.1| conserved hypothetical protein [Ricinus comm...    55   6e-06

>ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249976 [Vitis vinifera]
          Length = 1007

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 64/136 (47%), Positives = 82/136 (60%), Gaps = 5/136 (3%)
 Frame = +1

Query: 13  SIPSIIYSYAVTMLGRISHGLTQVMNQDTLLAYLSHCSRSTRVYPIEFVSGEDTMVEDDL 192
           SIPS I+SYAVT+LGRISH L  VMNQ+TLLAYLSHCS+ST V   E       M+E D+
Sbjct: 515 SIPSRIFSYAVTLLGRISHALKDVMNQNTLLAYLSHCSKSTIVDNSESFF---PMIEGDI 571

Query: 193 PTEINNRITCSVRLDMVHKS-----DGDSEIQSQGLLEQSKIAVPHVADQLEVHNKADNC 357
           P        CS  +DM+  +      G SE ++Q  LE  K A P +  QLEVH++    
Sbjct: 572 P-------NCSC-IDMISPAGMSLQQGASENENQKRLEPRKSATPLLDCQLEVHSEVAKS 623

Query: 358 VKFILVNIGEIWPLTK 405
           +K IL+ I +IW L +
Sbjct: 624 IKLILLKINDIWFLVQ 639


>emb|CBI18100.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 64/136 (47%), Positives = 82/136 (60%), Gaps = 5/136 (3%)
 Frame = +1

Query: 13  SIPSIIYSYAVTMLGRISHGLTQVMNQDTLLAYLSHCSRSTRVYPIEFVSGEDTMVEDDL 192
           SIPS I+SYAVT+LGRISH L  VMNQ+TLLAYLSHCS+ST V   E       M+E D+
Sbjct: 515 SIPSRIFSYAVTLLGRISHALKDVMNQNTLLAYLSHCSKSTIVDNSESFF---PMIEGDI 571

Query: 193 PTEINNRITCSVRLDMVHKS-----DGDSEIQSQGLLEQSKIAVPHVADQLEVHNKADNC 357
           P        CS  +DM+  +      G SE ++Q  LE  K A P +  QLEVH++    
Sbjct: 572 P-------NCSC-IDMISPAGMSLQQGASENENQKRLEPRKSATPLLDCQLEVHSEVAKS 623

Query: 358 VKFILVNIGEIWPLTK 405
           +K IL+ I +IW L +
Sbjct: 624 IKLILLKINDIWFLVQ 639


>ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|222867661|gb|EEF04792.1|
           predicted protein [Populus trichocarpa]
          Length = 949

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
 Frame = +1

Query: 13  SIPSIIYSYAVTMLGRISHGLTQVMNQDTLLAYLSHCSR-STRVYPIEFVSGEDTMVEDD 189
           +IP  ++SYAVT+LGRIS  L +V++QDTLLAYLS CSR STR   +E  S    +V+D 
Sbjct: 501 NIPPRLFSYAVTLLGRISSALREVVDQDTLLAYLSRCSRSSTRGTEVE-ESSLLPVVDDA 559

Query: 190 LPTEINNRITCSVRLDMVHKSDGDSEIQSQGLLEQSKIAVPHVADQLEVHNKADNCVKFI 369
           + T     +   V + M+   +  S++Q     E   +A   V  Q +  ++    V  I
Sbjct: 560 VLTHSRKDVNNPVGVPMLQTGNETSKVQPVISCELEDLATSIVECQADELDEVMKSVNLI 619

Query: 370 LVNIGEIWPLTK 405
           L  + + W L +
Sbjct: 620 LARVRDAWLLVQ 631


>ref|XP_003623391.1| Integrator complex subunit [Medicago truncatula]
           gi|355498406|gb|AES79609.1| Integrator complex subunit
           [Medicago truncatula]
          Length = 906

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
 Frame = +1

Query: 13  SIPSIIYSYAVTMLGRISHGLTQVMNQDTLLAYLSHCSRSTRVYPIEFVSGED----TMV 180
           SIP +++SYAVT+LGRI    + +M++D LLAYL   SR           GE      ++
Sbjct: 468 SIPPVMFSYAVTLLGRIYCAFSDIMDRDALLAYLCEKSRPPSYSTSNINHGEGDQQLPLI 527

Query: 181 EDDLPTEINNRITCSVRLDMVHKSDGDSEIQSQGLLEQSKIAVPHVADQLEVHNKADNCV 360
           E D P   +N +              DS I S+ + EQ ++A   V       ++    V
Sbjct: 528 EGDTPNCASNGVI-------------DSTIASEIMKEQKEVANYQVEQHQSEDSEVTTVV 574

Query: 361 KFILVNIGEIWPLTK 405
            +IL    ++W +T+
Sbjct: 575 NYILAKFPDMWQMTE 589


>ref|XP_002526688.1| conserved hypothetical protein [Ricinus communis]
           gi|223533988|gb|EEF35710.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 890

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/73 (46%), Positives = 45/73 (61%)
 Frame = +1

Query: 13  SIPSIIYSYAVTMLGRISHGLTQVMNQDTLLAYLSHCSRSTRVYPIEFVSGEDTMVEDDL 192
           SIP   +SYAVT+LGRIS  L  +++Q TLLAY+S CSR+     +E V GE    E  L
Sbjct: 486 SIPPRYFSYAVTLLGRISFALRDILDQSTLLAYISRCSRAPISSGME-VEGE----ESSL 540

Query: 193 PTEINNRITCSVR 231
           P   +N I C ++
Sbjct: 541 PVGTSN-IECQLK 552


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