BLASTX nr result

ID: Atractylodes21_contig00037181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037181
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...   142   2e-32
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]   139   2e-31
gb|ABA96076.1| retrotransposon protein, putative, unclassified [...   139   3e-31
ref|XP_002464673.1| hypothetical protein SORBIDRAFT_01g023130 [S...   138   4e-31
gb|ABF94034.1| retrotransposon protein, putative, unclassified [...   138   5e-31

>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score =  142 bits (359), Expect = 2e-32
 Identities = 68/120 (56%), Positives = 88/120 (73%)
 Frame = +1

Query: 4    GIMIDQSGYAKKILQSAGMADCNPSKYPMEPRLNLSIDKDGVSVNATEYRRLIGSLRYLT 183
            GI I Q  YAK+I++ +GMADCNP+  PME  L  S   D   ++AT+YRR IG LRYL 
Sbjct: 960  GITIKQEAYAKRIMEESGMADCNPNCIPMEFGLQFSKALDEPEIDATQYRRKIGCLRYLM 1019

Query: 184  HARPDLGYSVGVLSRYMESPKESHLKAAKQILRYIKGTIRYGLMYCKGGDGKFLGYSDSS 363
            H RPD+ YSVG+LSRYM+SP+ESH  A KQ+LRY++GT+ +GL + +G   K +GYSDSS
Sbjct: 1020 HTRPDMAYSVGILSRYMQSPRESHGNALKQVLRYLQGTLGHGLEFKRGSTQKLVGYSDSS 1079


>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/119 (53%), Positives = 88/119 (73%)
 Frame = +1

Query: 4    GIMIDQSGYAKKILQSAGMADCNPSKYPMEPRLNLSIDKDGVSVNATEYRRLIGSLRYLT 183
            GI I+Q  YA+++L+   +  CNP   P+ P   L+ DK+GV V+ T Y++++GSL YLT
Sbjct: 819  GIFINQRKYAQEVLERFNLYQCNPVHNPVVPGFKLTRDKEGVEVDGTLYKQMVGSLMYLT 878

Query: 184  HARPDLGYSVGVLSRYMESPKESHLKAAKQILRYIKGTIRYGLMYCKGGDGKFLGYSDS 360
              RPDL +SV ++SRYME P ESHL AAK+ILRY+KGT+ +G+ Y KGGD KF+GY+DS
Sbjct: 879  ATRPDLMFSVSLISRYMEHPTESHLLAAKRILRYVKGTVEFGVFYKKGGDDKFIGYTDS 937


>gb|ABA96076.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1351

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/120 (54%), Positives = 88/120 (73%), Gaps = 1/120 (0%)
 Frame = +1

Query: 4    GIMIDQSGYAKKILQSAGMADCNPSKYPMEPRLNLSIDKDGVSVNATEYRRLIGSLRYLT 183
            GIM+ Q+ YAK++++ AG+ DCNP+  PME RL LS D     V+AT+YRRL+GSLRYLT
Sbjct: 1076 GIMLQQTAYAKRVVELAGLTDCNPALTPMEERLKLSRDSTAEEVDATQYRRLVGSLRYLT 1135

Query: 184  HARPDLGYSVGVLSRYMESPKESHLKAAKQILRYIKGTIRYGLMYCK-GGDGKFLGYSDS 360
            H RPDL +SVG +SR+M+ P   H +A K+I+RY+ GT+ +GL Y +  G   F+GYSDS
Sbjct: 1136 HTRPDLAFSVGYVSRFMQRPTTEHQQAVKRIIRYVAGTLDHGLYYPRCPGKAHFVGYSDS 1195


>ref|XP_002464673.1| hypothetical protein SORBIDRAFT_01g023130 [Sorghum bicolor]
           gi|241918527|gb|EER91671.1| hypothetical protein
           SORBIDRAFT_01g023130 [Sorghum bicolor]
          Length = 885

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/119 (55%), Positives = 86/119 (72%)
 Frame = +1

Query: 4   GIMIDQSGYAKKILQSAGMADCNPSKYPMEPRLNLSIDKDGVSVNATEYRRLIGSLRYLT 183
           GI I QS YA KIL+SAG+A CNPS  PMEPRL LS      +V+AT YR ++GSLRYL 
Sbjct: 583 GITICQSAYAAKILESAGLAGCNPSHTPMEPRLKLSKISSAPAVDATMYRSIVGSLRYLV 642

Query: 184 HARPDLGYSVGVLSRYMESPKESHLKAAKQILRYIKGTIRYGLMYCKGGDGKFLGYSDS 360
           ++RPDL YSVG +SR+ME+P   HL A K++LRY+ GT+ +G  Y +  + + +GYSDS
Sbjct: 643 NSRPDLAYSVGYISRFMENPTTEHLSAVKRVLRYVAGTLHFGCCYKRKKEAQLVGYSDS 701


>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1409

 Score =  138 bits (347), Expect = 5e-31
 Identities = 69/117 (58%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
 Frame = +1

Query: 13   IDQSGYAKKILQSAGMADCNPSKYPMEPRLNLSIDKDGVSVNATEYRRLIGSLRYLTHAR 192
            + Q+ YAKK+L   GM +CN    P++PR  LS D +G  V+ATEYRR+IGSLRYL H R
Sbjct: 1140 LKQTAYAKKLLSQFGMMECNSVSIPIDPRSQLSKDPEGHPVDATEYRRIIGSLRYLLHTR 1199

Query: 193  PDLGYSVGVLSRYMESPKESHLKAAKQILRYIKGTIRYGLMYCKG-GDGKFLGYSDS 360
            PDL Y+VGV SR+ME P   H KA KQILRYIKGT+ YGL+Y  G G  K  GY+DS
Sbjct: 1200 PDLSYAVGVASRFMERPTVMHFKAVKQILRYIKGTMDYGLVYAAGTGALKITGYTDS 1256


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