BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037056
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]        200   1e-49
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]...   196   1e-48
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...   196   2e-48
gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subc...   195   3e-48
gb|AAP12935.1| retrotransposon protein, putative, unclassified [...   195   3e-48

>emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]
          Length = 893

 Score =  200 bits (508), Expect = 1e-49
 Identities = 96/161 (59%), Positives = 119/161 (73%), Gaps = 1/161 (0%)
 Frame = -3

Query: 489 LWYLDNGASNHMTGNQEFFAELNREVTGQVRFGDGSRVQIEGKGSILLKCNNGEHKTVSE 310
           LWYLDNGASNHM+G++  F EL+  VTGQVRFGD S VQI G+GSIL  C NG+   + +
Sbjct: 173 LWYLDNGASNHMSGDRRKFRELDETVTGQVRFGDASSVQIMGQGSILFSCKNGDQWLLDD 232

Query: 309 VYYIPALCSNILSLGQLTEEGYKIEMLNEHLTVHDVY-GKLTMKVQRSKNRLYKVNLHTT 133
           VYYIP+LC N++SLGQLTE G+++ M  + L V D    +L MKV+R+ NRLY++ L   
Sbjct: 233 VYYIPSLCCNMVSLGQLTETGHRVVMDGDDLEVFDKNPWRLVMKVRRTSNRLYRIELQLA 292

Query: 132 QPVCLAISLDDEAWLWHARLGHVNFRVLESMVEKNMVRGVP 10
            PVCL  SLDD AWLWHARLGHVNF  L+ +V+K MV GVP
Sbjct: 293 SPVCLLASLDDPAWLWHARLGHVNFHALKLLVDKEMVAGVP 333


>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108710383|gb|ABF98178.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1339

 Score =  196 bits (499), Expect = 1e-48
 Identities = 96/161 (59%), Positives = 116/161 (72%), Gaps = 1/161 (0%)
 Frame = -3

Query: 489 LWYLDNGASNHMTGNQEFFAELNREVTGQVRFGDGSRVQIEGKGSILLKCNNGEHKTVSE 310
           LWYLDNGASNHM+G+   F EL+  VTGQVRFGD S VQI GKGSIL  C NG+   + +
Sbjct: 313 LWYLDNGASNHMSGDHRKFRELDETVTGQVRFGDASSVQIMGKGSILFSCKNGDQWLLDD 372

Query: 309 VYYIPALCSNILSLGQLTEEGYKIEMLNEHLTVHDVY-GKLTMKVQRSKNRLYKVNLHTT 133
           VYYIP+L  N++SLGQLTE G+++ M  + L V D    +L MKV+RS NRLY++ L   
Sbjct: 373 VYYIPSLYCNMVSLGQLTETGHRVVMDGDDLEVFDKNPWRLVMKVRRSSNRLYRIELQLA 432

Query: 132 QPVCLAISLDDEAWLWHARLGHVNFRVLESMVEKNMVRGVP 10
            PVCL  SLDD AWLWHARLGHVNF  L+ +V+K M  GVP
Sbjct: 433 SPVCLLASLDDPAWLWHARLGHVNFHALKLLVDKEMAAGVP 473


>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score =  196 bits (497), Expect = 2e-48
 Identities = 88/161 (54%), Positives = 119/161 (73%)
 Frame = -3

Query: 486 WYLDNGASNHMTGNQEFFAELNREVTGQVRFGDGSRVQIEGKGSILLKCNNGEHKTVSEV 307
           WYLDNGASNHMTG++ FF+ELN  + G+V+FGDGS V+I GKGSI+ +   GE K ++ +
Sbjct: 201 WYLDNGASNHMTGDKSFFSELNESIKGRVKFGDGSCVKINGKGSIIFEAKTGEQKLLTNI 260

Query: 306 YYIPALCSNILSLGQLTEEGYKIEMLNEHLTVHDVYGKLTMKVQRSKNRLYKVNLHTTQP 127
           YYIP L SNILSLGQ TE+G  + M + +LT+ D  G+L +KV RS NRLYKV+L   +P
Sbjct: 261 YYIPELRSNILSLGQATEQGCDVRMKDNYLTLRDPSGRLLVKVLRSPNRLYKVSLKVGKP 320

Query: 126 VCLAISLDDEAWLWHARLGHVNFRVLESMVEKNMVRGVPRL 4
            CL   +++E W WHARLGH+NF+ ++ M +  MVRG+P +
Sbjct: 321 SCLLTKINEEPWRWHARLGHINFKTIKDMAKLEMVRGLPEI 361


>gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1303

 Score =  195 bits (496), Expect = 3e-48
 Identities = 94/163 (57%), Positives = 119/163 (73%), Gaps = 1/163 (0%)
 Frame = -3

Query: 489 LWYLDNGASNHMTGNQEFFAELNREVTGQVRFGDGSRVQIEGKGSILLKCNNGEHKTVSE 310
           LWYLDNGASNHMTG++  F EL+  VTG VRFGD S VQI GKG IL  C NG+   + +
Sbjct: 353 LWYLDNGASNHMTGDRRKFRELDETVTGVVRFGDASSVQIMGKGLILFACKNGDQWLLDD 412

Query: 309 VYYIPALCSNILSLGQLTEEGYKIEMLNEHLTVHDVY-GKLTMKVQRSKNRLYKVNLHTT 133
           VYYIP+LC N++SLGQLTE G+++ M N+ L V D    +L +KV+R+ NRLY++ L   
Sbjct: 413 VYYIPSLCCNMVSLGQLTETGHRVVMDNDDLEVFDKNPWRLVIKVRRTSNRLYRIELQLA 472

Query: 132 QPVCLAISLDDEAWLWHARLGHVNFRVLESMVEKNMVRGVPRL 4
            PVCL  SL D AWLWHARLGHVNF+ L+ +V+K M  GVP++
Sbjct: 473 SPVCLLTSLGDPAWLWHARLGHVNFQTLKLLVDKEMAAGVPQV 515


>gb|AAP12935.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1283

 Score =  195 bits (496), Expect = 3e-48
 Identities = 94/163 (57%), Positives = 119/163 (73%), Gaps = 1/163 (0%)
 Frame = -3

Query: 489 LWYLDNGASNHMTGNQEFFAELNREVTGQVRFGDGSRVQIEGKGSILLKCNNGEHKTVSE 310
           LWYLDNGASNHMTG++  F EL+  VTG VRFGD S VQI GKG IL  C NG+   + +
Sbjct: 353 LWYLDNGASNHMTGDRRKFRELDETVTGVVRFGDASSVQIMGKGLILFACKNGDQWLLDD 412

Query: 309 VYYIPALCSNILSLGQLTEEGYKIEMLNEHLTVHDVY-GKLTMKVQRSKNRLYKVNLHTT 133
           VYYIP+LC N++SLGQLTE G+++ M N+ L V D    +L +KV+R+ NRLY++ L   
Sbjct: 413 VYYIPSLCCNMVSLGQLTETGHRVVMDNDDLEVFDKNPWRLVIKVRRTSNRLYRIELQLA 472

Query: 132 QPVCLAISLDDEAWLWHARLGHVNFRVLESMVEKNMVRGVPRL 4
            PVCL  SL D AWLWHARLGHVNF+ L+ +V+K M  GVP++
Sbjct: 473 SPVCLLTSLGDPAWLWHARLGHVNFQTLKLLVDKEMAAGVPQV 515