BLASTX nr result

ID: Atractylodes21_contig00037033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037033
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530545.1| protein binding protein, putative [Ricinus c...    69   5e-10
ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
emb|CBI16460.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_002530545.1| protein binding protein, putative [Ricinus communis]
           gi|223529907|gb|EEF31836.1| protein binding protein,
           putative [Ricinus communis]
          Length = 324

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 46/140 (32%), Positives = 61/140 (43%), Gaps = 24/140 (17%)
 Frame = +2

Query: 2   WLYRCNPCEFDVHLHCANAKMPT-----------------PPLQHHHSFPA--VTHP--- 115
           WLYRC PCEFD HL CA   +P                  P LQHH+SFP   ++H    
Sbjct: 157 WLYRCAPCEFDAHLECAMGAVPVAAQQLSQYQPQPQPQPQPQLQHHNSFPGAIISHQYQQ 216

Query: 116 --NQFIAPMAAQAQPLMHSTSVGHVQSYWQPPQTPAPVGVQSYQLPPQPSGPANGLANAM 289
             N+ + P  AQ+     S ++G  Q  +Q P                  G  N + + +
Sbjct: 217 YGNRVVNPPPAQSF-FAQSQNMGTTQGCYQQPAV----------------GNNNTIMDVL 259

Query: 290 MTGVVEGMMQQLGQNLVQDL 349
           + G V G  Q LGQNLVQ +
Sbjct: 260 VQGFVNGAAQHLGQNLVQSI 279


>ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|222858396|gb|EEE95943.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 46/129 (35%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
 Frame = +2

Query: 2   WLYRCNPCEFDVHLHCANA--KMPTPPLQHHHSFPAVTHPNQFIAPMAAQAQPLMHSTSV 175
           WLYRC+ CEFD H+ CA +    P P +QH +S P   + N     +  Q QP +   + 
Sbjct: 156 WLYRCSACEFDAHMKCAMSVNNTPLPHVQHSNSLPVANNVN-----IQYQQQPGLGGANY 210

Query: 176 G--HVQSYWQPPQTPAPVGVQSYQLP----PQPSGPANGLAN-----AMMTGVVEGMMQQ 322
           G  H QS    P        Q  QL      QPSG  NG AN      M+ G V+   QQ
Sbjct: 211 GYRHSQSMGAMPMLQQRQQRQQRQLQQVSYQQPSGGPNGAANGTIMDTMVQGFVDAAAQQ 270

Query: 323 LGQNLVQDL 349
           +GQ   Q +
Sbjct: 271 VGQTFAQSI 279


>emb|CBI16460.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 39/129 (30%), Positives = 55/129 (42%), Gaps = 13/129 (10%)
 Frame = +2

Query: 2   WLYRCNPCEFDVHLHCANAKMPTPPLQ-------HHHSFPA-VTHPNQFIAPMAAQAQPL 157
           WLYRC PC FDVHL+CA +  P  P         +H S P+    PNQ +  + A  Q  
Sbjct: 163 WLYRCGPCGFDVHLNCALSNQPPQPQMVSSDNHFNHRSIPSNGVQPNQNVTFVPANVQGT 222

Query: 158 MHSTSVGHVQSYWQPPQTPAPVGVQSY-----QLPPQPSGPANGLANAMMTGVVEGMMQQ 322
             +    +VQ+    P  P       Y      +  Q  G  NG+   ++  V  GM Q 
Sbjct: 223 --NQVAYYVQANGMAPMAPPQAYPGHYYGNQMAVNGQNQGGMNGMKGLLVGSVASGMGQA 280

Query: 323 LGQNLVQDL 349
           + Q +V  +
Sbjct: 281 VAQEIVHSV 289


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