BLASTX nr result

ID: Atractylodes21_contig00037018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037018
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297982.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
gb|ABK26204.1| unknown [Picea sitchensis]                              57   1e-06
ref|XP_004143872.1| PREDICTED: uncharacterized protein LOC101210...    56   4e-06

>ref|XP_002297982.1| predicted protein [Populus trichocarpa] gi|222845240|gb|EEE82787.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/42 (57%), Positives = 33/42 (78%)
 Frame = +3

Query: 165 PMIKRAESSSVKFNDSNRNSPVVVFAHGAGAPSTSEWMIRWR 290
           P  +R ++ S   ND + +SPVVVFAHGAGAPS+S+WM+RW+
Sbjct: 6   PTKRRRKTKSEGTNDKSSSSPVVVFAHGAGAPSSSDWMLRWK 47


>gb|ABK26204.1| unknown [Picea sitchensis]
          Length = 236

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
 Frame = +3

Query: 111 KRPRTVESEYEQVVQQYAPMIKRAESSSVKFNDSNRNS-PVVVFAHGAGAPSTSEWMIRW 287
           KR RT+ES+ E             ES +    D+N N  P++VFAHGAGAPSTSEWMIRW
Sbjct: 8   KRSRTMESKEE-------------ESKTSPPPDNNENKKPLLVFAHGAGAPSTSEWMIRW 54

Query: 288 RN 293
           +N
Sbjct: 55  KN 56


>ref|XP_004143872.1| PREDICTED: uncharacterized protein LOC101210114 [Cucumis sativus]
           gi|449501792|ref|XP_004161460.1| PREDICTED:
           uncharacterized LOC101210114 [Cucumis sativus]
          Length = 236

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
 Frame = +3

Query: 108 SKRPR---TVESEYEQVVQQYAPMIKRAESSSVKFNDSNRNSPVVVFAHGAGAPSTSEWM 278
           SKR R   T++  +E ++         A SSSV     NR SPVVVFAHGAGAPS+SEWM
Sbjct: 7   SKRRRKSLTIDDAFETLL---------ATSSSV-----NRLSPVVVFAHGAGAPSSSEWM 52

Query: 279 IRWRN 293
           IRW++
Sbjct: 53  IRWKD 57


Top