BLASTX nr result

ID: Atractylodes21_contig00036869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036869
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27495.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31
ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
emb|CBI24106.3| unnamed protein product [Vitis vinifera]              137   1e-30
ref|XP_002314741.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30

>emb|CBI27495.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score =  139 bits (351), Expect = 2e-31
 Identities = 63/82 (76%), Positives = 73/82 (89%)
 Frame = +1

Query: 4   PGQVTYASVLNVYCRTGLYEKAEEVFWEMDNKGFNKCVVAYASMIAMYGKTNRIRDAMRL 183
           PGQVTYAS++NVYCR  LY KAE VF EM+ KGFNKCVVAY+SM+ MYGKT R+R+AMRL
Sbjct: 335 PGQVTYASIINVYCRMELYSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRL 394

Query: 184 VARMKERGVEPNVWIYNSLLDM 249
           VA+MKERG EPNVW+YNSL+DM
Sbjct: 395 VAKMKERGCEPNVWVYNSLMDM 416


>ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Vitis vinifera]
          Length = 603

 Score =  139 bits (351), Expect = 2e-31
 Identities = 63/82 (76%), Positives = 73/82 (89%)
 Frame = +1

Query: 4   PGQVTYASVLNVYCRTGLYEKAEEVFWEMDNKGFNKCVVAYASMIAMYGKTNRIRDAMRL 183
           PGQVTYAS++NVYCR  LY KAE VF EM+ KGFNKCVVAY+SM+ MYGKT R+R+AMRL
Sbjct: 397 PGQVTYASIINVYCRMELYSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRL 456

Query: 184 VARMKERGVEPNVWIYNSLLDM 249
           VA+MKERG EPNVW+YNSL+DM
Sbjct: 457 VAKMKERGCEPNVWVYNSLMDM 478


>ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Vitis vinifera]
          Length = 609

 Score =  137 bits (344), Expect = 1e-30
 Identities = 61/82 (74%), Positives = 73/82 (89%)
 Frame = +1

Query: 4   PGQVTYASVLNVYCRTGLYEKAEEVFWEMDNKGFNKCVVAYASMIAMYGKTNRIRDAMRL 183
           PGQVTYAS++NVYCR  LY KAE +F EM+ KGFNKCVVAY+SM+ MYGKT R+R+AMRL
Sbjct: 398 PGQVTYASIINVYCRMELYSKAEMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRL 457

Query: 184 VARMKERGVEPNVWIYNSLLDM 249
           VA+MKERG +PNVW+YNSL+DM
Sbjct: 458 VAKMKERGCKPNVWVYNSLMDM 479


>emb|CBI24106.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score =  137 bits (344), Expect = 1e-30
 Identities = 61/82 (74%), Positives = 73/82 (89%)
 Frame = +1

Query: 4   PGQVTYASVLNVYCRTGLYEKAEEVFWEMDNKGFNKCVVAYASMIAMYGKTNRIRDAMRL 183
           PGQVTYAS++NVYCR  LY KAE +F EM+ KGFNKCVVAY+SM+ MYGKT R+R+AMRL
Sbjct: 321 PGQVTYASIINVYCRMELYSKAEMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRL 380

Query: 184 VARMKERGVEPNVWIYNSLLDM 249
           VA+MKERG +PNVW+YNSL+DM
Sbjct: 381 VAKMKERGCKPNVWVYNSLMDM 402


>ref|XP_002314741.1| predicted protein [Populus trichocarpa] gi|222863781|gb|EEF00912.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/82 (78%), Positives = 71/82 (86%)
 Frame = +1

Query: 4   PGQVTYASVLNVYCRTGLYEKAEEVFWEMDNKGFNKCVVAYASMIAMYGKTNRIRDAMRL 183
           PGQVTYASV+N YCR GLY KAE VF EM+ KGF+KCVVAY+SMI+MYGKT R RDA RL
Sbjct: 320 PGQVTYASVINAYCRAGLYSKAEMVFSEMEEKGFDKCVVAYSSMISMYGKTGRARDATRL 379

Query: 184 VARMKERGVEPNVWIYNSLLDM 249
           VA+MK +G EPNVWIYNSLLDM
Sbjct: 380 VAKMKLKGCEPNVWIYNSLLDM 401


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