BLASTX nr result

ID: Atractylodes21_contig00036857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036857
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 i...   145   3e-33
ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i...   145   3e-33
emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]   145   3e-33
ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu...   144   7e-33
ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-l...   144   1e-32

>ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis
           vinifera]
          Length = 447

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/80 (86%), Positives = 78/80 (97%)
 Frame = +3

Query: 3   PKNVSEGEVSALFSQYGTLKDLQILRGSQQTSKGCAFVKYETKEQAVAAIEGLNGKHEME 182
           PKNVSE EVS+LFS+YGT+KDLQILRGSQQTSKGCAF+KYETKEQA+AA+E +NGKH+ME
Sbjct: 121 PKNVSEAEVSSLFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 180

Query: 183 GSTVPLVVKWADTEKERQAR 242
           GS+VPLVVKWADTEKERQAR
Sbjct: 181 GSSVPLVVKWADTEKERQAR 200



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/78 (32%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   PKNVSEGEVSALFSQYGTLKDLQILRG-SQQTSKGCAFVKYETKEQAVAAIEGLNGKHEM 179
           PKN++E ++ A+F ++  + ++ I++  + + S+GC FV   ++++A  A+   + K  +
Sbjct: 23  PKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSRQEADKAVNACHNKRTL 82

Query: 180 EGSTVPLVVKWADTEKER 233
            G++ PL VK+AD E ER
Sbjct: 83  PGASSPLQVKYADGELER 100


>ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis
           vinifera] gi|296086641|emb|CBI32276.3| unnamed protein
           product [Vitis vinifera]
          Length = 437

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/80 (86%), Positives = 78/80 (97%)
 Frame = +3

Query: 3   PKNVSEGEVSALFSQYGTLKDLQILRGSQQTSKGCAFVKYETKEQAVAAIEGLNGKHEME 182
           PKNVSE EVS+LFS+YGT+KDLQILRGSQQTSKGCAF+KYETKEQA+AA+E +NGKH+ME
Sbjct: 111 PKNVSEAEVSSLFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170

Query: 183 GSTVPLVVKWADTEKERQAR 242
           GS+VPLVVKWADTEKERQAR
Sbjct: 171 GSSVPLVVKWADTEKERQAR 190



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/78 (32%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   PKNVSEGEVSALFSQYGTLKDLQILRG-SQQTSKGCAFVKYETKEQAVAAIEGLNGKHEM 179
           PKN++E ++ A+F ++  + ++ I++  + + S+GC FV   ++++A  A+   + K  +
Sbjct: 23  PKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSRQEADKAVNACHNKRTL 82

Query: 180 EGSTVPLVVKWADTEKER 233
            G++ PL VK+AD E ER
Sbjct: 83  PGASSPLQVKYADGELER 100


>emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]
          Length = 450

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/80 (86%), Positives = 78/80 (97%)
 Frame = +3

Query: 3   PKNVSEGEVSALFSQYGTLKDLQILRGSQQTSKGCAFVKYETKEQAVAAIEGLNGKHEME 182
           PKNVSE EVS+LFS+YGT+KDLQILRGSQQTSKGCAF+KYETKEQA+AA+E +NGKH+ME
Sbjct: 165 PKNVSEAEVSSLFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 224

Query: 183 GSTVPLVVKWADTEKERQAR 242
           GS+VPLVVKWADTEKERQAR
Sbjct: 225 GSSVPLVVKWADTEKERQAR 244


>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
           gi|223540085|gb|EEF41662.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 436

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/80 (86%), Positives = 76/80 (95%)
 Frame = +3

Query: 3   PKNVSEGEVSALFSQYGTLKDLQILRGSQQTSKGCAFVKYETKEQAVAAIEGLNGKHEME 182
           PKNVSE EVS LFS YGT+KDLQILRGSQQTSKGCAF+KYETKEQA+AA+E +NGKH+ME
Sbjct: 111 PKNVSEAEVSELFSTYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170

Query: 183 GSTVPLVVKWADTEKERQAR 242
           GS+VPLVVKWADTEKERQAR
Sbjct: 171 GSSVPLVVKWADTEKERQAR 190


>ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
          Length = 431

 Score =  144 bits (362), Expect = 1e-32
 Identities = 68/80 (85%), Positives = 77/80 (96%)
 Frame = +3

Query: 3   PKNVSEGEVSALFSQYGTLKDLQILRGSQQTSKGCAFVKYETKEQAVAAIEGLNGKHEME 182
           PKNVSE E+SALFS+YGT+KDLQILRGSQQTSKGCAF+KYETKEQA+ A+E +NGKH+ME
Sbjct: 111 PKNVSEVEISALFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALTALEAINGKHKME 170

Query: 183 GSTVPLVVKWADTEKERQAR 242
           GS+VPLVVKWADTEKERQAR
Sbjct: 171 GSSVPLVVKWADTEKERQAR 190



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/78 (33%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   PKNVSEGEVSALFSQYGTLKDLQILRG-SQQTSKGCAFVKYETKEQAVAAIEGLNGKHEM 179
           PK+++E E+ A+F ++  + ++ I++  + + S+GC FV   ++E+A  A+   + K  +
Sbjct: 23  PKHMTEPELLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSREEADKAVNACHNKRTL 82

Query: 180 EGSTVPLVVKWADTEKER 233
            G++ PL VK+AD E ER
Sbjct: 83  PGASSPLQVKYADGELER 100


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