BLASTX nr result

ID: Atractylodes21_contig00036821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036821
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO22687.1| putative WD-40 repeat protein (MSI3) [Arabidopsis...    93   2e-17
gb|AAB70244.1| WD-40 repeat protein [Arabidopsis thaliana]             93   2e-17
ref|NP_195231.1| histone-binding protein RBBP4 [Arabidopsis thal...    93   2e-17
ref|XP_002867094.1| hypothetical protein ARALYDRAFT_912880 [Arab...    93   2e-17
ref|XP_002312960.1| nucleosome/chromatin assembly factor group [...    92   4e-17

>gb|AAO22687.1| putative WD-40 repeat protein (MSI3) [Arabidopsis thaliana]
          Length = 424

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/45 (91%), Positives = 44/45 (97%)
 Frame = +3

Query: 3   SHGGHKAKISDFSWNKNEPWVISSVAEDNALQVWQMAESIYHEDD 137
           SHGGHKAKISDF+WNK+EPWVISSVAEDN+LQVWQMAESIY EDD
Sbjct: 359 SHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDD 403


>gb|AAB70244.1| WD-40 repeat protein [Arabidopsis thaliana]
          Length = 424

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/45 (91%), Positives = 44/45 (97%)
 Frame = +3

Query: 3   SHGGHKAKISDFSWNKNEPWVISSVAEDNALQVWQMAESIYHEDD 137
           SHGGHKAKISDF+WNK+EPWVISSVAEDN+LQVWQMAESIY EDD
Sbjct: 359 SHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDD 403


>ref|NP_195231.1| histone-binding protein RBBP4 [Arabidopsis thaliana]
           gi|12644054|sp|O22469.2|MSI3_ARATH RecName: Full=WD-40
           repeat-containing protein MSI3
           gi|2924516|emb|CAA17770.1| WD-40 repeat protein (MSI3)
           [Arabidopsis thaliana] gi|7270456|emb|CAB80222.1| WD-40
           repeat protein (MSI3) [Arabidopsis thaliana]
           gi|57222170|gb|AAW38992.1| At4g35050 [Arabidopsis
           thaliana] gi|109134167|gb|ABG25081.1| At4g35050
           [Arabidopsis thaliana] gi|332661055|gb|AEE86455.1|
           histone-binding protein RBBP4 [Arabidopsis thaliana]
          Length = 424

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/45 (91%), Positives = 44/45 (97%)
 Frame = +3

Query: 3   SHGGHKAKISDFSWNKNEPWVISSVAEDNALQVWQMAESIYHEDD 137
           SHGGHKAKISDF+WNK+EPWVISSVAEDN+LQVWQMAESIY EDD
Sbjct: 359 SHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDD 403


>ref|XP_002867094.1| hypothetical protein ARALYDRAFT_912880 [Arabidopsis lyrata subsp.
           lyrata] gi|297312930|gb|EFH43353.1| hypothetical protein
           ARALYDRAFT_912880 [Arabidopsis lyrata subsp. lyrata]
          Length = 405

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/45 (91%), Positives = 44/45 (97%)
 Frame = +3

Query: 3   SHGGHKAKISDFSWNKNEPWVISSVAEDNALQVWQMAESIYHEDD 137
           SHGGHKAKISDF+WNK+EPWVISSVAEDN+LQVWQMAESIY EDD
Sbjct: 359 SHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDD 403


>ref|XP_002312960.1| nucleosome/chromatin assembly factor group [Populus trichocarpa]
           gi|222849368|gb|EEE86915.1| nucleosome/chromatin
           assembly factor group [Populus trichocarpa]
          Length = 406

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 40/45 (88%), Positives = 43/45 (95%)
 Frame = +3

Query: 3   SHGGHKAKISDFSWNKNEPWVISSVAEDNALQVWQMAESIYHEDD 137
           SHGGHKAKISDFSWNKNEPWVISSVA+DN LQVWQMAESIY ++D
Sbjct: 361 SHGGHKAKISDFSWNKNEPWVISSVADDNTLQVWQMAESIYRDED 405


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