BLASTX nr result

ID: Atractylodes21_contig00036805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036805
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-...   276   4e-72
ref|XP_002512344.1| excision repair cross-complementing 1 ercc1,...   274   3e-71
ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-...   271   2e-70
ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-...   271   2e-70
ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-...   271   2e-70

>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
            gi|296088298|emb|CBI36743.3| unnamed protein product
            [Vitis vinifera]
          Length = 398

 Score =  276 bits (707), Expect = 4e-72
 Identities = 139/183 (75%), Positives = 155/183 (84%), Gaps = 5/183 (2%)
 Frame = -2

Query: 1023 EDVVKPLLEVTRTALLHDCTLLCGWSLEECGRYLETIKIYENKPADIIQGQMDTDYLSRL 844
            EDV+KPLLEVTRTALLHDCTLLC WSLEECGRYLETIK+YENK ADIIQGQ DTDYLSRL
Sbjct: 183  EDVIKPLLEVTRTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQTDTDYLSRL 242

Query: 843  SHSLTAVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKR 664
            +H+LT VRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKR
Sbjct: 243  THALTTVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKR 302

Query: 663  SISKHPSA----VQTSAQPFTPSEAKESE-DTGPSSKRDKKEPNLTVRSALTEAFAKYKK 499
             +   P+     V  +A+P + +E  E E D   +SKR KKEP LTV+SAL+ AFA+Y +
Sbjct: 303  VVPSCPAVPENPVHNNAEPSSVNEVVEVENDVEDASKRRKKEPELTVKSALSAAFAQYSE 362

Query: 498  KVG 490
            K+G
Sbjct: 363  KIG 365


>ref|XP_002512344.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
            communis] gi|223548305|gb|EEF49796.1| excision repair
            cross-complementing 1 ercc1, putative [Ricinus communis]
          Length = 392

 Score =  274 bits (700), Expect = 3e-71
 Identities = 135/177 (76%), Positives = 151/177 (85%), Gaps = 4/177 (2%)
 Frame = -2

Query: 1023 EDVVKPLLEVTRTALLHDCTLLCGWSLEECGRYLETIKIYENKPADIIQGQMDTDYLSRL 844
            EDVVKPLLEVT+TALLHDCTLLC WSLEECGRYLETIK+YENKPAD+IQGQMDTDYLSRL
Sbjct: 178  EDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYLSRL 237

Query: 843  SHSLTAVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKR 664
            +H+LT +RHVNKTDVVTLGSTFGSLS+IMDASMEDLARCPGIGERKVKRLYDTFHEPFKR
Sbjct: 238  THALTTIRHVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKR 297

Query: 663  SISKHPSAVQTSAQPFTPSEAKESEDTG----PSSKRDKKEPNLTVRSALTEAFAKY 505
             +S HP+  +TS +   P+   E  + G      SK  KKEP LTV+SAL+ AF+KY
Sbjct: 298  VVSSHPAVPETSQKDSEPALVDEVTEVGKGEYDESKWRKKEPELTVKSALSAAFSKY 354


>ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis sativus]
          Length = 412

 Score =  271 bits (692), Expect = 2e-70
 Identities = 134/183 (73%), Positives = 150/183 (81%), Gaps = 6/183 (3%)
 Frame = -2

Query: 1023 EDVVKPLLEVTRTALLHDCTLLCGWSLEECGRYLETIKIYENKPADIIQGQMDTDYLSRL 844
            EDVVKPLLEVT+TALLHDCTLLC WSLEECGRYLETIK+YENKPAD+IQG MDTDYLSRL
Sbjct: 187  EDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRL 246

Query: 843  SHSLTAVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKR 664
            +H LT+VRHVNKTDVVTLG+TFGSLSHIMDASMEDLARCPGIGERKV+RLYDTFHEPFKR
Sbjct: 247  THVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKR 306

Query: 663  SISKHPSAVQTSAQPFT-PSEAKESEDTG-----PSSKRDKKEPNLTVRSALTEAFAKYK 502
             +S HP+  +T  Q  T P  + E +D           + KKEP L V+SAL+ AFAKY 
Sbjct: 307  VVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALSAAFAKYA 366

Query: 501  KKV 493
             K+
Sbjct: 367  DKI 369


>ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis sativus]
          Length = 391

 Score =  271 bits (692), Expect = 2e-70
 Identities = 134/183 (73%), Positives = 150/183 (81%), Gaps = 6/183 (3%)
 Frame = -2

Query: 1023 EDVVKPLLEVTRTALLHDCTLLCGWSLEECGRYLETIKIYENKPADIIQGQMDTDYLSRL 844
            EDVVKPLLEVT+TALLHDCTLLC WSLEECGRYLETIK+YENKPAD+IQG MDTDYLSRL
Sbjct: 188  EDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRL 247

Query: 843  SHSLTAVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKR 664
            +H LT+VRHVNKTDVVTLG+TFGSLSHIMDASMEDLARCPGIGERKV+RLYDTFHEPFKR
Sbjct: 248  THVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKR 307

Query: 663  SISKHPSAVQTSAQPFT-PSEAKESEDTG-----PSSKRDKKEPNLTVRSALTEAFAKYK 502
             +S HP+  +T  Q  T P  + E +D           + KKEP L V+SAL+ AFAKY 
Sbjct: 308  VVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALSAAFAKYA 367

Query: 501  KKV 493
             K+
Sbjct: 368  DKI 370


>ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-1-like [Glycine max]
          Length = 398

 Score =  271 bits (692), Expect = 2e-70
 Identities = 138/192 (71%), Positives = 155/192 (80%), Gaps = 14/192 (7%)
 Frame = -2

Query: 1023 EDVVKPLLEVTRTALLHDCTLLCGWSLEECGRYLETIKIYENKPADIIQGQMDTDYLSRL 844
            EDV+KPLLEVT+TA+LHDCTLLCGWSLEECGRYLETIK+YENKPADIIQGQMDTDYLSRL
Sbjct: 183  EDVIKPLLEVTKTAMLHDCTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDTDYLSRL 242

Query: 843  SHSLTAVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKR 664
            +HSLT VRHVNKTDVVTLG+TFGSLS+IM ASMEDLARCPGIGERKVKRL+DTFHEPFKR
Sbjct: 243  THSLTTVRHVNKTDVVTLGTTFGSLSNIMGASMEDLARCPGIGERKVKRLFDTFHEPFKR 302

Query: 663  SISKHPSAVQTSAQ--PFTPSEA------------KESEDTGPSSKRDKKEPNLTVRSAL 526
              S   +  +TS Q  P +P  +             + EDT   SKR KKEP +TV+SAL
Sbjct: 303  VESSRQAIPETSVQNKPASPESSIRNKAESSSLIEDKQEDTEDVSKRRKKEPEVTVKSAL 362

Query: 525  TEAFAKYKKKVG 490
            + AFAKY  +VG
Sbjct: 363  SAAFAKYSGRVG 374


Top