BLASTX nr result

ID: Atractylodes21_contig00036713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036713
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300637.1| predicted protein [Populus trichocarpa] gi|2...    58   4e-18
emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]    59   8e-16
ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li...    59   8e-16
ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, ...    54   2e-15
emb|CBI40731.3| unnamed protein product [Vitis vinifera]               59   2e-15

>ref|XP_002300637.1| predicted protein [Populus trichocarpa] gi|222842363|gb|EEE79910.1|
           predicted protein [Populus trichocarpa]
          Length = 1183

 Score = 57.8 bits (138), Expect(3) = 4e-18
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +3

Query: 168 CTFSLWCLNPALVFKNIADSSLSVILTSGGSSP 266
           CT SLWCLNPA+VFK+IAD SLSVILTSG  SP
Sbjct: 453 CTLSLWCLNPAVVFKDIADLSLSVILTSGTLSP 485



 Score = 45.8 bits (107), Expect(3) = 4e-18
 Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
 Frame = +1

Query: 46  KGLFSSLTYFFSEDGRYICDYQLALQCHMKSDARLAVGD--CPVLLVC 183
           +GLFSSLTYFFS +G  + D+QLAL+ ++K D + A GD  C + L C
Sbjct: 413 EGLFSSLTYFFSRNGCQVSDFQLALRRYVKRDGKKA-GDWTCTLSLWC 459



 Score = 32.3 bits (72), Expect(3) = 4e-18
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +2

Query: 2   NISKQCFPILQDCATKAFSLRLPT 73
           NIS+QCFPIL DCA +A      T
Sbjct: 374 NISQQCFPILLDCAKQAIKAATDT 397


>emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]
          Length = 1261

 Score = 58.5 bits (140), Expect(2) = 8e-16
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +3

Query: 168 CTFSLWCLNPALVFKNIADSSLSVILTSGGSSP 266
           CTFSLWCLNPA+VF+ IAD SLSVILTSG  SP
Sbjct: 389 CTFSLWCLNPAVVFRGIADLSLSVILTSGTLSP 421



 Score = 49.7 bits (117), Expect(2) = 8e-16
 Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 11/72 (15%)
 Frame = +1

Query: 1   KHIKAVLPNLTRLCH---------KGLFSSLTYFFSEDGRYICDYQLALQCHMKSDARLA 153
           K IKA +   +R+ H         +GL+S+L+YFFSE+G +  DYQLALQ ++K DA   
Sbjct: 324 KAIKAAIDIESRVAHLSGMSVITLEGLYSALSYFFSENGLHTVDYQLALQRYVKKDAGSV 383

Query: 154 VGD--CPVLLVC 183
            G   C   L C
Sbjct: 384 AGSWTCTFSLWC 395


>ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
          Length = 1255

 Score = 58.5 bits (140), Expect(2) = 8e-16
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +3

Query: 168 CTFSLWCLNPALVFKNIADSSLSVILTSGGSSP 266
           CTFSLWCLNPA+VF+ IAD SLSVILTSG  SP
Sbjct: 451 CTFSLWCLNPAVVFRGIADLSLSVILTSGTLSP 483



 Score = 49.7 bits (117), Expect(2) = 8e-16
 Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 11/72 (15%)
 Frame = +1

Query: 1   KHIKAVLPNLTRLCH---------KGLFSSLTYFFSEDGRYICDYQLALQCHMKSDARLA 153
           K IKA +   +R+ H         +GL+S+L+YFFSE+G +  DYQLALQ ++K DA   
Sbjct: 386 KAIKAAIDIESRVAHLSGMSVITLEGLYSALSYFFSENGLHTVDYQLALQRYVKKDAGSV 445

Query: 154 VGD--CPVLLVC 183
            G   C   L C
Sbjct: 446 AGSWTCTFSLWC 457


>ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
           communis] gi|223551394|gb|EEF52880.1| brca1 interacting
           protein helicase 1 brip1, putative [Ricinus communis]
          Length = 1248

 Score = 53.9 bits (128), Expect(2) = 2e-15
 Identities = 27/55 (49%), Positives = 37/55 (67%)
 Frame = +1

Query: 13  AVLPNLTRLCHKGLFSSLTYFFSEDGRYICDYQLALQCHMKSDARLAVGDCPVLL 177
           A L  +  +  +GLFSSLTYFFS +G ++ DYQLALQ H+K D +  VG+  + L
Sbjct: 405 AHLSGMAVIVLEGLFSSLTYFFSRNGCHVSDYQLALQRHIKRDRKSPVGEWTLTL 459



 Score = 53.1 bits (126), Expect(2) = 2e-15
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = +3

Query: 171 TFSLWCLNPALVFKNIADSSLSVILTSGGSSP 266
           T SLWCLNPA+VF++IAD SLSVILTSG  SP
Sbjct: 458 TLSLWCLNPAVVFRDIADLSLSVILTSGTLSP 489


>emb|CBI40731.3| unnamed protein product [Vitis vinifera]
          Length = 1218

 Score = 58.5 bits (140), Expect(2) = 2e-15
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +3

Query: 168 CTFSLWCLNPALVFKNIADSSLSVILTSGGSSP 266
           CTFSLWCLNPA+VF+ IAD SLSVILTSG  SP
Sbjct: 481 CTFSLWCLNPAVVFRGIADLSLSVILTSGTLSP 513



 Score = 48.1 bits (113), Expect(2) = 2e-15
 Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 9/57 (15%)
 Frame = +1

Query: 1   KHIKAVLPNLTRLCH---------KGLFSSLTYFFSEDGRYICDYQLALQCHMKSDA 144
           K IKA +   +R+ H         +GL+S+L+YFFSE+G +  DYQLALQ ++K DA
Sbjct: 401 KAIKAAIDIESRVAHLSGMSVITLEGLYSALSYFFSENGLHTVDYQLALQRYVKKDA 457


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