BLASTX nr result

ID: Atractylodes21_contig00036708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036708
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptas...    97   1e-18
gb|ABN04852.1| RNA-directed DNA polymerase (Reverse transcriptas...    90   2e-16
gb|AER13156.1| putative retrotransposon [Phaseolus vulgaris]           87   1e-15
ref|XP_003548768.1| PREDICTED: uncharacterized protein LOC100775...    87   1e-15
ref|XP_003528143.1| PREDICTED: uncharacterized protein LOC100778...    87   1e-15

>gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 391

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/89 (52%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
 Frame = +3

Query: 3   CLESSVTSIWVNGSPTEEFRIRRGLGQGDPLSPFLFILAMEGLHMLIHRAIHASKLHGLQ 182
           C+ ++  S+ VNGSPT+EF + RGL QGDPLSPFLF+LA EGLH+++   + AS   G +
Sbjct: 17  CITTATASVLVNGSPTDEFPLGRGLLQGDPLSPFLFLLAAEGLHVMMKAMVDASLFRGYR 76

Query: 183 VGNG-DVMVSHLFYADDVVFIGEWNVTNV 266
           VG+G +V+VSHL +ADD + +GE +  NV
Sbjct: 77  VGSGNEVVVSHLQFADDTLLLGEKSWANV 105


>gb|ABN04852.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 469

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
 Frame = +3

Query: 3   CLESSVTSIWVNGSPTEEFRIRRGLGQGDPLSPFLFILAMEGLHMLIHRAIHASKLHGLQ 182
           C+ ++ TS+ VNGSP +EF +RRGL QGD LSPFLF+LA EG H+L+         HG  
Sbjct: 94  CIGTATTSVLVNGSPIDEFSLRRGLRQGDRLSPFLFLLAAEGFHVLMKSMTDIDLFHGYT 153

Query: 183 VGNGD-VMVSHLFYADDVVFIGEWNVTNV 266
           VG  D V VSHL +ADD + +G+ +  N+
Sbjct: 154 VGRNDQVSVSHLQFADDTLILGDKSWANI 182


>gb|AER13156.1| putative retrotransposon [Phaseolus vulgaris]
          Length = 1759

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/88 (50%), Positives = 62/88 (70%)
 Frame = +3

Query: 3    CLESSVTSIWVNGSPTEEFRIRRGLGQGDPLSPFLFILAMEGLHMLIHRAIHASKLHGLQ 182
            CLES++ S+ VNGS TEEF+  RGL QGDPL+ FLFI+  EGL  L+ +A+ A+ L GL+
Sbjct: 1103 CLESAIVSLLVNGSTTEEFKPSRGLRQGDPLAHFLFIVVAEGLAGLVRQALKANMLTGLK 1162

Query: 183  VGNGDVMVSHLFYADDVVFIGEWNVTNV 266
            +G  +V +  L +ADD +F+ E  + NV
Sbjct: 1163 IGRQEVEMCILQFADDTLFLCEDTIDNV 1190


>ref|XP_003548768.1| PREDICTED: uncharacterized protein LOC100775187 [Glycine max]
          Length = 725

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/87 (49%), Positives = 57/87 (65%)
 Frame = +3

Query: 3   CLESSVTSIWVNGSPTEEFRIRRGLGQGDPLSPFLFILAMEGLHMLIHRAIHASKLHGLQ 182
           CL S+  SI VNGSPT+EF+ +RGL QGDPL+P LF+L  EGL  L+  A+  +  H   
Sbjct: 17  CLTSASISILVNGSPTDEFKPQRGLRQGDPLAPLLFVLVAEGLTGLMREAVSRNLFHSFM 76

Query: 183 VGNGDVMVSHLFYADDVVFIGEWNVTN 263
           VG   V V+ L +ADD +F GE ++ N
Sbjct: 77  VGKNKVAVNILQFADDTIFFGEASMDN 103



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/87 (39%), Positives = 48/87 (55%)
 Frame = +3

Query: 6   LESSVTSIWVNGSPTEEFRIRRGLGQGDPLSPFLFILAMEGLHMLIHRAIHASKLHGLQV 185
           L+S+  SI +NGSP +EF   RGL QGDPL+  LF +  EG+  ++  A+  +      V
Sbjct: 606 LQSATISILINGSPYKEFVPTRGLRQGDPLALLLFNIVGEGITGMMREAVQKNLYRSFLV 665

Query: 186 GNGDVMVSHLFYADDVVFIGEWNVTNV 266
           G      + L Y DD +F+GE    NV
Sbjct: 666 GKKKEATNILQYVDDTIFVGEAAWENV 692


>ref|XP_003528143.1| PREDICTED: uncharacterized protein LOC100778359 [Glycine max]
          Length = 2621

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/88 (46%), Positives = 61/88 (69%)
 Frame = +3

Query: 3    CLESSVTSIWVNGSPTEEFRIRRGLGQGDPLSPFLFILAMEGLHMLIHRAIHASKLHGLQ 182
            CL+S+  S+ VNGSPT+EF+ +RGL QGDPL+PFLF +  E L+ L+  A+ A+   G  
Sbjct: 1277 CLKSASISVLVNGSPTKEFKPQRGLRQGDPLAPFLFNIVAEALNGLMRTALAANLYKGFN 1336

Query: 183  VGNGDVMVSHLFYADDVVFIGEWNVTNV 266
            + + ++ +S L YADD +F GE ++ NV
Sbjct: 1337 IASSEISISLLQYADDTIFFGEASMKNV 1364


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