BLASTX nr result

ID: Atractylodes21_contig00036626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036626
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...   179   8e-43
ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arab...   178   1e-42
ref|NP_199327.4| DNA-directed RNA polymerase III subunit C2 [Ara...   177   2e-42
ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III s...   177   3e-42
ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III s...   177   3e-42

>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score =  179 bits (453), Expect = 8e-43
 Identities = 86/101 (85%), Positives = 92/101 (91%)
 Frame = +2

Query: 2    EGRSRNGGLRVGEMERDCLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTR 181
            EGR+RNGGLRVGEMERDCLIAYG S LIYERLMISSDPFEVQVCR CGLLGY N++ KT 
Sbjct: 1058 EGRARNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTG 1117

Query: 182  ICSTCKNGDNISAMKLPYACKLLFQELQSMNIVPRLTLADS 304
            ICS+CKNGDNIS MKLPYACKLL QELQSMNIVPRL LA++
Sbjct: 1118 ICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1158


>ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arabidopsis lyrata subsp.
            lyrata] gi|297309357|gb|EFH39781.1| hypothetical protein
            ARALYDRAFT_917015 [Arabidopsis lyrata subsp. lyrata]
          Length = 1165

 Score =  178 bits (452), Expect = 1e-42
 Identities = 83/101 (82%), Positives = 91/101 (90%)
 Frame = +2

Query: 2    EGRSRNGGLRVGEMERDCLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTR 181
            EG+S+NGGLRVGEMERDCLIAYG S LIYERLMISSDPFEVQVCR CGLLGY NY+ K  
Sbjct: 1065 EGKSKNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKA 1124

Query: 182  ICSTCKNGDNISAMKLPYACKLLFQELQSMNIVPRLTLADS 304
            +CSTCKNGDNI+ MKLPYACKLLFQELQSMN+VPRL L ++
Sbjct: 1125 VCSTCKNGDNIATMKLPYACKLLFQELQSMNVVPRLKLVEA 1165


>ref|NP_199327.4| DNA-directed RNA polymerase III subunit C2 [Arabidopsis thaliana]
            gi|332007826|gb|AED95209.1| DNA-directed RNA polymerase
            III subunit C2 [Arabidopsis thaliana]
          Length = 1161

 Score =  177 bits (449), Expect = 2e-42
 Identities = 82/101 (81%), Positives = 91/101 (90%)
 Frame = +2

Query: 2    EGRSRNGGLRVGEMERDCLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTR 181
            EG+S+NGGLRVGEMERDCLIAYG S LIYERLMISSDPFEVQVCR CGLLGY NY+ K  
Sbjct: 1061 EGKSKNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKA 1120

Query: 182  ICSTCKNGDNISAMKLPYACKLLFQELQSMNIVPRLTLADS 304
            +C+TCKNGDNI+ MKLPYACKLLFQELQSMN+VPRL L ++
Sbjct: 1121 VCTTCKNGDNIATMKLPYACKLLFQELQSMNVVPRLKLTEA 1161


>ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Glycine
            max]
          Length = 1152

 Score =  177 bits (448), Expect = 3e-42
 Identities = 84/101 (83%), Positives = 91/101 (90%)
 Frame = +2

Query: 2    EGRSRNGGLRVGEMERDCLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTR 181
            EGR+RNGGLRVGEMERDCLIAYG S LIYERLM+SSDPFEVQVC  CGLLGY N++ KT 
Sbjct: 1052 EGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQVCTACGLLGYYNHKLKTG 1111

Query: 182  ICSTCKNGDNISAMKLPYACKLLFQELQSMNIVPRLTLADS 304
            ICS+CKNGDNIS MKLPYACKL+ QELQSMNIVPRL LAD+
Sbjct: 1112 ICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLADA 1152


>ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Glycine
            max]
          Length = 1166

 Score =  177 bits (448), Expect = 3e-42
 Identities = 84/101 (83%), Positives = 91/101 (90%)
 Frame = +2

Query: 2    EGRSRNGGLRVGEMERDCLIAYGTSNLIYERLMISSDPFEVQVCRKCGLLGYINYQTKTR 181
            EGR+RNGGLRVGEMERDCLIAYG S LIYERLM+SSDPFEVQVC  CGLLGY N++ KT 
Sbjct: 1066 EGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQVCTACGLLGYYNHKLKTG 1125

Query: 182  ICSTCKNGDNISAMKLPYACKLLFQELQSMNIVPRLTLADS 304
            ICS+CKNGDNIS MKLPYACKL+ QELQSMNIVPRL LAD+
Sbjct: 1126 ICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLADA 1166


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