BLASTX nr result

ID: Atractylodes21_contig00036620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036620
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
gb|AAO61490.1| arm repeat-containing protein [Nicotiana tabacum]      113   2e-23
ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4...   107   8e-22
ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus ...    97   1e-18
emb|CBI33734.3| unnamed protein product [Vitis vinifera]               86   2e-15

>ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|222855944|gb|EEE93491.1|
           predicted protein [Populus trichocarpa]
          Length = 822

 Score =  113 bits (283), Expect = 1e-23
 Identities = 70/152 (46%), Positives = 86/152 (56%), Gaps = 13/152 (8%)
 Frame = +3

Query: 3   NLIPNYTVKALIANWCELNNVKLPDPVKAISLNKPS-----SPRSTWAVGSPGKNLIVSG 167
           NLI NYTVKALIANWCE NNVKLPDP+K++S N+PS     S  S  A GSPG+N+I S 
Sbjct: 290 NLITNYTVKALIANWCESNNVKLPDPIKSMSFNQPSPLLPISSESNQATGSPGQNMISSS 349

Query: 168 GIHQEEASLVHHVHSSSEDSIPGIPGNGHELD--------NENDRLAESGERSLDSGGPX 323
           GI +E +S +H  HS+SE S+  I GNG  LD        +  +R + S ER+LDS    
Sbjct: 350 GIQREGSSPLHS-HSTSESSLSVIVGNGQGLDIARISSLTSSEERSSNSEERNLDSVHHC 408

Query: 324 XXXXXXXXXXARAGEDEGSQEGHKRSTSTSSA 419
                          D    + H RS S SSA
Sbjct: 409 SASPSRKEVSTAVRADGLLSQNHNRSASASSA 440


>gb|AAO61490.1| arm repeat-containing protein [Nicotiana tabacum]
          Length = 790

 Score =  113 bits (282), Expect = 2e-23
 Identities = 64/107 (59%), Positives = 76/107 (71%), Gaps = 7/107 (6%)
 Frame = +3

Query: 3   NLIPNYTVKALIANWCELNNVKLPDPVKAISLNKPS-SPRSTWAVGSPGKNLIVSGGIHQ 179
           NLIPNYTVKALIANWCE+NNVKLPDP+K++SLN+PS SP ST + GSP K+LI S  + Q
Sbjct: 288 NLIPNYTVKALIANWCEINNVKLPDPMKSLSLNQPSLSPDSTQSSGSPRKSLI-SSTVSQ 346

Query: 180 EEASLVHHVHSSSEDSIPGIPGNGHELDNE------NDRLAESGERS 302
            E S   H  SSSE+S+PG+ GN    D E       DR+A SGE S
Sbjct: 347 REESSPSHPRSSSEESLPGVGGNILAFDVERMRIKSEDRMAHSGEIS 393


>ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
          Length = 809

 Score =  107 bits (268), Expect = 8e-22
 Identities = 64/131 (48%), Positives = 74/131 (56%), Gaps = 26/131 (19%)
 Frame = +3

Query: 3   NLIPNYTVKALIANWCELNNVKLPDPVKAISLN--------------------------K 104
           NLIPNYTVKALIANWCE NNVKLPDPVK+++LN                          +
Sbjct: 288 NLIPNYTVKALIANWCESNNVKLPDPVKSLNLNQSSPLLAHAEPGAPRDAHNVPHSRASQ 347

Query: 105 PSSPRSTWAVGSPGKNLIVSGGIHQEEASLVHHVHSSSEDSIPGIPGNGHELDNENDRLA 284
           P SP ST   GSPG NL+ SGGIH+E  S   H  S SE S+ G+ GNGH  D E     
Sbjct: 348 PMSPESTRFTGSPGNNLVSSGGIHREGTS-PSHPRSRSEGSLSGVAGNGHGSDIE----- 401

Query: 285 ESGERSLDSGG 317
              +RS+DS G
Sbjct: 402 ---DRSMDSVG 409


>ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223535790|gb|EEF37452.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 799

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 60/130 (46%), Positives = 72/130 (55%), Gaps = 25/130 (19%)
 Frame = +3

Query: 3   NLIPNYTVKALIANWCELNNVKLPDPVKAISLNKPS------------------------ 110
           NLIPNYTVKALIANWCE NNVKLPDPVK++S N+PS                        
Sbjct: 250 NLIPNYTVKALIANWCESNNVKLPDPVKSVSFNQPSALLIHAESGTPRGSHGFYSRGNQP 309

Query: 111 -SPRSTWAVGSPGKNLIVSGGIHQEEASLVHHVHSSSEDSIPGIPGNGHELDNENDRLAE 287
            SP ST +  SP +N I S  +H+E  S   H  S+S+ S+ GI GN   LD     LA 
Sbjct: 310 MSPESTRSTDSPDRNWI-SSSVHRESTSPC-HPRSTSDSSLSGIVGNEQGLDMARISLAS 367

Query: 288 SGERSLDSGG 317
           S ERS++  G
Sbjct: 368 SEERSVNLEG 377


>emb|CBI33734.3| unnamed protein product [Vitis vinifera]
          Length = 682

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 42/57 (73%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
 Frame = +3

Query: 3   NLIPNYTVKALIANWCELNNVKLPDPVKAISLN-KPSSPRSTWAVGSPGKNLIVSGG 170
           NLIPNYTVKALIANWCE NNVKLPDPVK+++LN +P SP ST   GSPG NL+ S G
Sbjct: 288 NLIPNYTVKALIANWCESNNVKLPDPVKSLNLNHQPMSPESTRFTGSPGNNLVSSVG 344


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