BLASTX nr result

ID: Atractylodes21_contig00036601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036601
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554636.1| PREDICTED: 60S ribosomal protein L18-3-like ...    60   2e-07
ref|XP_002874343.1| 60S ribosomal protein L18 [Arabidopsis lyrat...    60   2e-07
ref|XP_002882427.1| hypothetical protein ARALYDRAFT_477850 [Arab...    59   3e-07
gb|AAA69928.1| cytoplasmic ribosomal protein L18 [Arabidopsis th...    59   4e-07
ref|NP_187210.1| 60S ribosomal protein L18-2 [Arabidopsis thalia...    59   4e-07

>ref|XP_003554636.1| PREDICTED: 60S ribosomal protein L18-3-like [Glycine max]
          Length = 187

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/66 (50%), Positives = 44/66 (66%)
 Frame = -2

Query: 200 KDKIALVVGTVTDAIGVNEMPSVKVIVLWFTEKARSRIGNGNAECWW*VLDARSTSYQSS 21
           +DKIA+VVGTVTD I V E+P++K+  L FTE+AR+RI     EC    L     + ++ 
Sbjct: 75  EDKIAVVVGTVTDDIRVYEVPALKITALKFTERARARIEKAGGEC----LTFDQLALRAP 130

Query: 20  LGQNTV 3
           LGQNTV
Sbjct: 131 LGQNTV 136


>ref|XP_002874343.1| 60S ribosomal protein L18 [Arabidopsis lyrata subsp. lyrata]
           gi|297320180|gb|EFH50602.1| 60S ribosomal protein L18
           [Arabidopsis lyrata subsp. lyrata]
          Length = 187

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/66 (46%), Positives = 45/66 (68%)
 Frame = -2

Query: 200 KDKIALVVGTVTDAIGVNEMPSVKVIVLWFTEKARSRIGNGNAECWW*VLDARSTSYQSS 21
           +DKIA++VGT+TD + V+E+P++KV  L FTE+AR+RI     EC    L     + ++ 
Sbjct: 75  EDKIAVLVGTITDDLRVHEIPAIKVTALRFTERARARIEKAGGEC----LTFDQLALKAP 130

Query: 20  LGQNTV 3
           LGQNTV
Sbjct: 131 LGQNTV 136


>ref|XP_002882427.1| hypothetical protein ARALYDRAFT_477850 [Arabidopsis lyrata subsp.
           lyrata] gi|297328267|gb|EFH58686.1| hypothetical protein
           ARALYDRAFT_477850 [Arabidopsis lyrata subsp. lyrata]
          Length = 187

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/66 (48%), Positives = 45/66 (68%)
 Frame = -2

Query: 200 KDKIALVVGTVTDAIGVNEMPSVKVIVLWFTEKARSRIGNGNAECWW*VLDARSTSYQSS 21
           +DKIA++VGTVTD + V+E+P++KV  L FTE+AR+RI     EC    L     + ++ 
Sbjct: 75  EDKIAVLVGTVTDDLRVHEIPAMKVTALRFTERARARIEKAGGEC----LTFDQLALRAP 130

Query: 20  LGQNTV 3
           LGQNTV
Sbjct: 131 LGQNTV 136


>gb|AAA69928.1| cytoplasmic ribosomal protein L18 [Arabidopsis thaliana]
          Length = 187

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/66 (46%), Positives = 45/66 (68%)
 Frame = -2

Query: 200 KDKIALVVGTVTDAIGVNEMPSVKVIVLWFTEKARSRIGNGNAECWW*VLDARSTSYQSS 21
           +DKIA++VGT+TD + V+E+P++KV  L FTE+AR+RI     EC    L     + ++ 
Sbjct: 75  EDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGEC----LTFDQLALRAP 130

Query: 20  LGQNTV 3
           LGQNTV
Sbjct: 131 LGQNTV 136


>ref|NP_187210.1| 60S ribosomal protein L18-2 [Arabidopsis thaliana]
           gi|21431838|sp|P42791.2|RL182_ARATH RecName: Full=60S
           ribosomal protein L18-2
           gi|6714451|gb|AAF26138.1|AC011620_14 putative 60S
           ribosomal protein L18 [Arabidopsis thaliana]
           gi|14335090|gb|AAK59824.1| AT3g05590/F18C1_14
           [Arabidopsis thaliana] gi|16974509|gb|AAL31164.1|
           AT3g05590/F18C1_14 [Arabidopsis thaliana]
           gi|332640742|gb|AEE74263.1| 60S ribosomal protein L18-2
           [Arabidopsis thaliana]
          Length = 187

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/66 (46%), Positives = 45/66 (68%)
 Frame = -2

Query: 200 KDKIALVVGTVTDAIGVNEMPSVKVIVLWFTEKARSRIGNGNAECWW*VLDARSTSYQSS 21
           +DKIA++VGT+TD + V+E+P++KV  L FTE+AR+RI     EC    L     + ++ 
Sbjct: 75  EDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGEC----LTFDQLALRAP 130

Query: 20  LGQNTV 3
           LGQNTV
Sbjct: 131 LGQNTV 136


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