BLASTX nr result

ID: Atractylodes21_contig00036541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036541
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316370.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_002311089.1| predicted protein [Populus trichocarpa] gi|2...   150   2e-34
ref|XP_002519531.1| Auxin response factor, putative [Ricinus com...   144   1e-32
emb|CBI31453.3| unnamed protein product [Vitis vinifera]              141   7e-32
ref|XP_002273590.1| PREDICTED: auxin response factor 18 [Vitis v...   141   7e-32

>ref|XP_002316370.1| predicted protein [Populus trichocarpa] gi|222865410|gb|EEF02541.1|
           predicted protein [Populus trichocarpa]
          Length = 669

 Score =  153 bits (386), Expect = 2e-35
 Identities = 84/144 (58%), Positives = 102/144 (70%), Gaps = 13/144 (9%)
 Frame = +3

Query: 3   ESSSGDTIANLSDS------------SMVVQNGPVESSSDEAGPWCKD-QKSEFGLETGH 143
           +S SGDT AN S              S   QNGP+E+SS    PW KD QK++ GLETGH
Sbjct: 526 QSCSGDTNANSSSDGHPGKAISDGSGSASQQNGPLENSSGGRCPWYKDYQKTDPGLETGH 585

Query: 144 CKIFMESEDVGRTLDLASFRSYEELYRKLADMFRVEKSVMLNNLIYHNAAGAVKHTGDEP 323
           CK+FMESEDVGRTLDL+   SYEEL+RKL +MF +E S ML+N++Y NAAGA KH GDEP
Sbjct: 586 CKVFMESEDVGRTLDLSVLGSYEELHRKLVNMFGIESSEMLSNVLYRNAAGATKHAGDEP 645

Query: 324 FSEFSQTALRLTIVTDRTISDELG 395
           FSEF +TA RLTI++D + SD +G
Sbjct: 646 FSEFLKTARRLTILSDAS-SDNVG 668


>ref|XP_002311089.1| predicted protein [Populus trichocarpa] gi|222850909|gb|EEE88456.1|
           predicted protein [Populus trichocarpa]
          Length = 671

 Score =  150 bits (378), Expect = 2e-34
 Identities = 78/135 (57%), Positives = 97/135 (71%), Gaps = 13/135 (9%)
 Frame = +3

Query: 3   ESSSGDTIANLSDS------------SMVVQNGPVESSSDEAGPWCKD-QKSEFGLETGH 143
           +S SGDT AN S              S + QNGP+E+SSDE   W KD QK++ GLET H
Sbjct: 528 QSCSGDTNANSSSDGNLGKASSDGSGSALQQNGPMENSSDERSTWYKDHQKTDLGLETDH 587

Query: 144 CKIFMESEDVGRTLDLASFRSYEELYRKLADMFRVEKSVMLNNLIYHNAAGAVKHTGDEP 323
           CK+F+ESED+GRTLDL+   SYEEL+RKLA MF +E S ML+N++Y +AAGA KH GDEP
Sbjct: 588 CKVFLESEDIGRTLDLSVLGSYEELHRKLASMFGIESSEMLSNVLYRDAAGATKHAGDEP 647

Query: 324 FSEFSQTALRLTIVT 368
           FSEF +TA RLTI++
Sbjct: 648 FSEFLKTARRLTILS 662


>ref|XP_002519531.1| Auxin response factor, putative [Ricinus communis]
           gi|223541394|gb|EEF42945.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 702

 Score =  144 bits (362), Expect = 1e-32
 Identities = 81/136 (59%), Positives = 96/136 (70%), Gaps = 6/136 (4%)
 Frame = +3

Query: 6   SSSG--DTIANLSDSS--MVVQNGPVESSSDEAGPWCKD--QKSEFGLETGHCKIFMESE 167
           SS G  D IAN SD S   + Q G  E SS E   WCK   Q++E  LETGHCK+FMESE
Sbjct: 567 SSEGNLDKIANFSDGSGSALHQQGLPEHSSYEGFQWCKGNRQETEPSLETGHCKVFMESE 626

Query: 168 DVGRTLDLASFRSYEELYRKLADMFRVEKSVMLNNLIYHNAAGAVKHTGDEPFSEFSQTA 347
           DVGRTLDL+   SY+ELYRKLADMF +E S  LNN++Y + AG VKH GDEPFS+F +TA
Sbjct: 627 DVGRTLDLSLLGSYDELYRKLADMFGIENSETLNNVLYRDIAGIVKHIGDEPFSDFMKTA 686

Query: 348 LRLTIVTDRTISDELG 395
            RLTI+ D + SD +G
Sbjct: 687 RRLTIIMDSS-SDNVG 701


>emb|CBI31453.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  141 bits (355), Expect = 7e-32
 Identities = 80/139 (57%), Positives = 94/139 (67%), Gaps = 16/139 (11%)
 Frame = +3

Query: 3   ESSSGDTIA------------NLSDSSMVV--QNGPVESSSDEAG-PWCKD-QKSEFGLE 134
           +S SGDT              N SD S     QNGP ESSSDE    W KD QK+  GLE
Sbjct: 440 QSCSGDTAGISSSDGNPEKTPNFSDGSGSAFHQNGPQESSSDEGLLTWYKDHQKTNLGLE 499

Query: 135 TGHCKIFMESEDVGRTLDLASFRSYEELYRKLADMFRVEKSVMLNNLIYHNAAGAVKHTG 314
           TGHCK+FMESEDVGRTLDL+   SYEELYRKLA+MF +E++ ML+N++Y + AG VKH G
Sbjct: 500 TGHCKVFMESEDVGRTLDLSILGSYEELYRKLANMFGIERAEMLSNVLYRDEAGIVKHIG 559

Query: 315 DEPFSEFSQTALRLTIVTD 371
           D PF EF +TA RLTI+ D
Sbjct: 560 DAPFGEFLKTARRLTILAD 578


>ref|XP_002273590.1| PREDICTED: auxin response factor 18 [Vitis vinifera]
          Length = 683

 Score =  141 bits (355), Expect = 7e-32
 Identities = 80/139 (57%), Positives = 94/139 (67%), Gaps = 16/139 (11%)
 Frame = +3

Query: 3   ESSSGDTIA------------NLSDSSMVV--QNGPVESSSDEAG-PWCKD-QKSEFGLE 134
           +S SGDT              N SD S     QNGP ESSSDE    W KD QK+  GLE
Sbjct: 540 QSCSGDTAGISSSDGNPEKTPNFSDGSGSAFHQNGPQESSSDEGLLTWYKDHQKTNLGLE 599

Query: 135 TGHCKIFMESEDVGRTLDLASFRSYEELYRKLADMFRVEKSVMLNNLIYHNAAGAVKHTG 314
           TGHCK+FMESEDVGRTLDL+   SYEELYRKLA+MF +E++ ML+N++Y + AG VKH G
Sbjct: 600 TGHCKVFMESEDVGRTLDLSILGSYEELYRKLANMFGIERAEMLSNVLYRDEAGIVKHIG 659

Query: 315 DEPFSEFSQTALRLTIVTD 371
           D PF EF +TA RLTI+ D
Sbjct: 660 DAPFGEFLKTARRLTILAD 678


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