BLASTX nr result

ID: Atractylodes21_contig00036492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036492
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...    89   3e-16
ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854...    59   3e-07
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...    59   3e-07
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]    59   3e-07
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]    59   3e-07

>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/58 (72%), Positives = 46/58 (79%)
 Frame = -2

Query: 175 KDDDVTWWIDSGATSHVCKDRKCFKTLEPVGDGYVLHMGNESGAPIVGRGSFSLVFSS 2
           +DD+V WWIDSGAT HVCKDR  FKT EPV DG VL+MGNES API+GRG   L FSS
Sbjct: 261 QDDEVAWWIDSGATIHVCKDRGWFKTYEPVQDGSVLYMGNESTAPILGRGKVVLEFSS 318


>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
           vinifera]
          Length = 478

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/52 (48%), Positives = 34/52 (65%)
 Frame = -2

Query: 157 WWIDSGATSHVCKDRKCFKTLEPVGDGYVLHMGNESGAPIVGRGSFSLVFSS 2
           WWID+GAT HVC D+K F T EP+ +G  + MGN + + I G+G   L  +S
Sbjct: 336 WWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTS 387


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/52 (48%), Positives = 34/52 (65%)
 Frame = -2

Query: 157 WWIDSGATSHVCKDRKCFKTLEPVGDGYVLHMGNESGAPIVGRGSFSLVFSS 2
           WWID+GAT HVC D+K F T EP+ +G  + MGN + + I G+G   L  +S
Sbjct: 336 WWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTS 387


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/52 (48%), Positives = 34/52 (65%)
 Frame = -2

Query: 157 WWIDSGATSHVCKDRKCFKTLEPVGDGYVLHMGNESGAPIVGRGSFSLVFSS 2
           WWID+GAT HVC D+K F T EP+ +G  + MGN + + I G+G   L  +S
Sbjct: 336 WWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTS 387


>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
          Length = 1096

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/52 (48%), Positives = 34/52 (65%)
 Frame = -2

Query: 157 WWIDSGATSHVCKDRKCFKTLEPVGDGYVLHMGNESGAPIVGRGSFSLVFSS 2
           WWID+GAT HVC D+K F T EP+ +G  + MGN + + I G+G   L  +S
Sbjct: 257 WWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTS 308


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