BLASTX nr result
ID: Atractylodes21_contig00036478
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00036478 (718 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2... 54 1e-11 ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2... 53 3e-11 ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2... 53 4e-11 ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 54 9e-11 gb|AAD26953.1| putative non-LTR retrolelement reverse transcript... 54 3e-10 >ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1| predicted protein [Populus trichocarpa] Length = 1386 Score = 54.3 bits (129), Expect(2) = 1e-11 Identities = 22/51 (43%), Positives = 32/51 (62%) Frame = +3 Query: 369 LWLAIHNHLPTQDKMALWKIHPPDMICPLCNTEPDSHSHLFFKCPYSNPVW 521 LW+A+ L TQDK+ + IH P+ C LC + H+HLFF+C Y+ +W Sbjct: 1232 LWMAVQQKLTTQDKLYRFGIHGPNR-CSLCLRNNEDHNHLFFECSYTKAIW 1281 Score = 41.2 bits (95), Expect(2) = 1e-11 Identities = 19/34 (55%), Positives = 22/34 (64%) Frame = +2 Query: 593 KSPLQVLRKIVFGAAVYHVWQERNYRLFQSRFRT 694 KS + RK+ F A VYHVWQERN R+F RT Sbjct: 1311 KSFVNFSRKLSFAATVYHVWQERNARIFAGMSRT 1344 >ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1| predicted protein [Populus trichocarpa] Length = 1046 Score = 52.8 bits (125), Expect(2) = 3e-11 Identities = 21/51 (41%), Positives = 31/51 (60%) Frame = +3 Query: 369 LWLAIHNHLPTQDKMALWKIHPPDMICPLCNTEPDSHSHLFFKCPYSNPVW 521 LW+ + L TQDK+ + IH P+ C LC + H+HLFF+C Y+ +W Sbjct: 892 LWMVVQQKLTTQDKLHRFGIHGPNR-CSLCLRNNEDHNHLFFECSYTKAIW 941 Score = 41.2 bits (95), Expect(2) = 3e-11 Identities = 19/34 (55%), Positives = 22/34 (64%) Frame = +2 Query: 593 KSPLQVLRKIVFGAAVYHVWQERNYRLFQSRFRT 694 KS + RK+ F A VYHVWQERN R+F RT Sbjct: 971 KSFINFSRKLSFAATVYHVWQERNARIFAGLSRT 1004 >ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1| predicted protein [Populus trichocarpa] Length = 331 Score = 52.8 bits (125), Expect(2) = 4e-11 Identities = 21/51 (41%), Positives = 31/51 (60%) Frame = +3 Query: 369 LWLAIHNHLPTQDKMALWKIHPPDMICPLCNTEPDSHSHLFFKCPYSNPVW 521 LW+ + L TQDK+ + IH P+ C LC + H+HLFF+C Y+ +W Sbjct: 177 LWMVVQQKLTTQDKLHRFGIHGPNR-CSLCLRNNEDHNHLFFECSYTKAIW 226 Score = 40.8 bits (94), Expect(2) = 4e-11 Identities = 19/34 (55%), Positives = 22/34 (64%) Frame = +2 Query: 593 KSPLQVLRKIVFGAAVYHVWQERNYRLFQSRFRT 694 KS + RK+ F A VYHVWQERN R+F RT Sbjct: 256 KSFVNFSRKLSFAATVYHVWQERNARIFAGLSRT 289 >ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1| predicted protein [Populus trichocarpa] Length = 517 Score = 54.3 bits (129), Expect(2) = 9e-11 Identities = 22/51 (43%), Positives = 32/51 (62%) Frame = +3 Query: 369 LWLAIHNHLPTQDKMALWKIHPPDMICPLCNTEPDSHSHLFFKCPYSNPVW 521 LW+A+ L TQDK+ + IH P+ C LC + H+HLFF+C Y+ +W Sbjct: 359 LWMAVQQKLTTQDKLHRFGIHGPNR-CSLCLRNNEDHNHLFFECSYTKAIW 408 Score = 38.1 bits (87), Expect(2) = 9e-11 Identities = 16/26 (61%), Positives = 18/26 (69%) Frame = +2 Query: 617 KIVFGAAVYHVWQERNYRLFQSRFRT 694 K+ F A VYHVWQERN R+F RT Sbjct: 446 KLSFAATVYHVWQERNARIFAGMSRT 471 >gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis thaliana] Length = 323 Score = 54.3 bits (129), Expect(2) = 3e-10 Identities = 20/51 (39%), Positives = 33/51 (64%) Frame = +3 Query: 372 WLAIHNHLPTQDKMALWKIHPPDMICPLCNTEPDSHSHLFFKCPYSNPVWN 524 W+A L T+D++ W ++ P +C LCN ++H HLFF+C +SN +W+ Sbjct: 172 WVAAWKRLHTRDRLTQWGLNIPT-VCVLCNVVDETHDHLFFQCQFSNEIWS 221 Score = 36.2 bits (82), Expect(2) = 3e-10 Identities = 18/51 (35%), Positives = 34/51 (66%) Frame = +2 Query: 560 ILEYLQIRAGSKSPLQVLRKIVFGAAVYHVWQERNYRLFQSRFRTDLDLVR 712 IL +L+ + SK+ L ++ K++F A+VY +W+ERN R+ + RT +++ Sbjct: 238 ILLWLKSASSSKN-LSLIIKLLFQASVYLIWRERNCRIHTTHSRTPPTIIK 287