BLASTX nr result

ID: Atractylodes21_contig00036478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036478
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    54   1e-11
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    53   3e-11
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    53   4e-11
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    54   9e-11
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript...    54   3e-10

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 54.3 bits (129), Expect(2) = 1e-11
 Identities = 22/51 (43%), Positives = 32/51 (62%)
 Frame = +3

Query: 369  LWLAIHNHLPTQDKMALWKIHPPDMICPLCNTEPDSHSHLFFKCPYSNPVW 521
            LW+A+   L TQDK+  + IH P+  C LC    + H+HLFF+C Y+  +W
Sbjct: 1232 LWMAVQQKLTTQDKLYRFGIHGPNR-CSLCLRNNEDHNHLFFECSYTKAIW 1281



 Score = 41.2 bits (95), Expect(2) = 1e-11
 Identities = 19/34 (55%), Positives = 22/34 (64%)
 Frame = +2

Query: 593  KSPLQVLRKIVFGAAVYHVWQERNYRLFQSRFRT 694
            KS +   RK+ F A VYHVWQERN R+F    RT
Sbjct: 1311 KSFVNFSRKLSFAATVYHVWQERNARIFAGMSRT 1344


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 52.8 bits (125), Expect(2) = 3e-11
 Identities = 21/51 (41%), Positives = 31/51 (60%)
 Frame = +3

Query: 369  LWLAIHNHLPTQDKMALWKIHPPDMICPLCNTEPDSHSHLFFKCPYSNPVW 521
            LW+ +   L TQDK+  + IH P+  C LC    + H+HLFF+C Y+  +W
Sbjct: 892  LWMVVQQKLTTQDKLHRFGIHGPNR-CSLCLRNNEDHNHLFFECSYTKAIW 941



 Score = 41.2 bits (95), Expect(2) = 3e-11
 Identities = 19/34 (55%), Positives = 22/34 (64%)
 Frame = +2

Query: 593  KSPLQVLRKIVFGAAVYHVWQERNYRLFQSRFRT 694
            KS +   RK+ F A VYHVWQERN R+F    RT
Sbjct: 971  KSFINFSRKLSFAATVYHVWQERNARIFAGLSRT 1004


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 52.8 bits (125), Expect(2) = 4e-11
 Identities = 21/51 (41%), Positives = 31/51 (60%)
 Frame = +3

Query: 369 LWLAIHNHLPTQDKMALWKIHPPDMICPLCNTEPDSHSHLFFKCPYSNPVW 521
           LW+ +   L TQDK+  + IH P+  C LC    + H+HLFF+C Y+  +W
Sbjct: 177 LWMVVQQKLTTQDKLHRFGIHGPNR-CSLCLRNNEDHNHLFFECSYTKAIW 226



 Score = 40.8 bits (94), Expect(2) = 4e-11
 Identities = 19/34 (55%), Positives = 22/34 (64%)
 Frame = +2

Query: 593 KSPLQVLRKIVFGAAVYHVWQERNYRLFQSRFRT 694
           KS +   RK+ F A VYHVWQERN R+F    RT
Sbjct: 256 KSFVNFSRKLSFAATVYHVWQERNARIFAGLSRT 289


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 54.3 bits (129), Expect(2) = 9e-11
 Identities = 22/51 (43%), Positives = 32/51 (62%)
 Frame = +3

Query: 369 LWLAIHNHLPTQDKMALWKIHPPDMICPLCNTEPDSHSHLFFKCPYSNPVW 521
           LW+A+   L TQDK+  + IH P+  C LC    + H+HLFF+C Y+  +W
Sbjct: 359 LWMAVQQKLTTQDKLHRFGIHGPNR-CSLCLRNNEDHNHLFFECSYTKAIW 408



 Score = 38.1 bits (87), Expect(2) = 9e-11
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = +2

Query: 617 KIVFGAAVYHVWQERNYRLFQSRFRT 694
           K+ F A VYHVWQERN R+F    RT
Sbjct: 446 KLSFAATVYHVWQERNARIFAGMSRT 471


>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 323

 Score = 54.3 bits (129), Expect(2) = 3e-10
 Identities = 20/51 (39%), Positives = 33/51 (64%)
 Frame = +3

Query: 372 WLAIHNHLPTQDKMALWKIHPPDMICPLCNTEPDSHSHLFFKCPYSNPVWN 524
           W+A    L T+D++  W ++ P  +C LCN   ++H HLFF+C +SN +W+
Sbjct: 172 WVAAWKRLHTRDRLTQWGLNIPT-VCVLCNVVDETHDHLFFQCQFSNEIWS 221



 Score = 36.2 bits (82), Expect(2) = 3e-10
 Identities = 18/51 (35%), Positives = 34/51 (66%)
 Frame = +2

Query: 560 ILEYLQIRAGSKSPLQVLRKIVFGAAVYHVWQERNYRLFQSRFRTDLDLVR 712
           IL +L+  + SK+ L ++ K++F A+VY +W+ERN R+  +  RT   +++
Sbjct: 238 ILLWLKSASSSKN-LSLIIKLLFQASVYLIWRERNCRIHTTHSRTPPTIIK 287


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