BLASTX nr result

ID: Atractylodes21_contig00036455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036455
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-co...   123   5e-48
emb|CBI15155.3| unnamed protein product [Vitis vinifera]              121   1e-47
ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-co...   107   4e-46
ref|NP_196398.2| SNF2 and helicase domain-containing protein [Ar...   119   2e-45
ref|XP_002873325.1| SNF2 domain-containing protein [Arabidopsis ...   120   3e-45

>ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
           [Vitis vinifera]
          Length = 1280

 Score =  123 bits (308), Expect(2) = 5e-48
 Identities = 59/76 (77%), Positives = 67/76 (88%)
 Frame = +3

Query: 219 RPFDIFHQINILWPGLLGKDKLAFAKTYCSMSSSRTYQGIVYQDFSKGIRLEELNVLLKQ 398
           RP+DIFHQIN+LWPGLLG+DK  FAK YC+++  R  QG V+QDFSKGIRLEELNVLLKQ
Sbjct: 364 RPYDIFHQINMLWPGLLGRDKYEFAKIYCAVNFVRGSQGKVFQDFSKGIRLEELNVLLKQ 423

Query: 399 TVMIRRLKEHVLMQLP 446
           TVMIRRLKEHVL +LP
Sbjct: 424 TVMIRRLKEHVLGELP 439



 Score = 93.2 bits (230), Expect(2) = 5e-48
 Identities = 46/70 (65%), Positives = 60/70 (85%)
 Frame = +2

Query: 2   KVVVISYKMLHNLKKSISEQKWAVLIVDESHHVRCTKRRSSEAGETQAVLDVSSKINRIV 181
           +VVVISY MLH L+KS+ E++W +LIVDESHH++CTK++ SE  + +AVLDV+ K+ RIV
Sbjct: 296 RVVVISYTMLHRLRKSMLEREWPLLIVDESHHLQCTKKK-SEPQKIKAVLDVAMKVRRIV 354

Query: 182 LLSGTPSLSR 211
           LLSGTPSLSR
Sbjct: 355 LLSGTPSLSR 364


>emb|CBI15155.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score =  121 bits (303), Expect(2) = 1e-47
 Identities = 58/75 (77%), Positives = 66/75 (88%)
 Frame = +3

Query: 222 PFDIFHQINILWPGLLGKDKLAFAKTYCSMSSSRTYQGIVYQDFSKGIRLEELNVLLKQT 401
           P+DIFHQIN+LWPGLLG+DK  FAK YC+++  R  QG V+QDFSKGIRLEELNVLLKQT
Sbjct: 367 PYDIFHQINMLWPGLLGRDKYEFAKIYCAVNFVRGSQGKVFQDFSKGIRLEELNVLLKQT 426

Query: 402 VMIRRLKEHVLMQLP 446
           VMIRRLKEHVL +LP
Sbjct: 427 VMIRRLKEHVLGELP 441



 Score = 93.6 bits (231), Expect(2) = 1e-47
 Identities = 48/77 (62%), Positives = 62/77 (80%)
 Frame = +2

Query: 2   KVVVISYKMLHNLKKSISEQKWAVLIVDESHHVRCTKRRSSEAGETQAVLDVSSKINRIV 181
           +VVVISY MLH L+KS+ E++W +LIVDESHH++CTK++ SE  + +AVLDV+ K+ RIV
Sbjct: 297 RVVVISYTMLHRLRKSMLEREWPLLIVDESHHLQCTKKK-SEPQKIKAVLDVAMKVRRIV 355

Query: 182 LLSGTPSLSRCS*AIRH 232
           LLSGTPSLSR    I H
Sbjct: 356 LLSGTPSLSRLPYDIFH 372


>ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
           [Glycine max]
          Length = 1193

 Score =  107 bits (267), Expect(2) = 4e-46
 Identities = 52/76 (68%), Positives = 62/76 (81%)
 Frame = +3

Query: 219 RPFDIFHQINILWPGLLGKDKLAFAKTYCSMSSSRTYQGIVYQDFSKGIRLEELNVLLKQ 398
           RP+DI+HQIN+  PGLLGK K  FAKTYC +   +  QG  + D+SKG+RLEELNVLLKQ
Sbjct: 363 RPYDIYHQINM--PGLLGKTKYEFAKTYCDLKYIKGIQGKFFADYSKGVRLEELNVLLKQ 420

Query: 399 TVMIRRLKEHVLMQLP 446
           TVMIRRLKEHV++QLP
Sbjct: 421 TVMIRRLKEHVMLQLP 436



 Score =  102 bits (255), Expect(2) = 4e-46
 Identities = 50/70 (71%), Positives = 62/70 (88%)
 Frame = +2

Query: 2   KVVVISYKMLHNLKKSISEQKWAVLIVDESHHVRCTKRRSSEAGETQAVLDVSSKINRIV 181
           +VVVISY MLH L+KS+ E++WA+LI+DESHHVRCTK+  +E GE QAVLDV+SK+ RI+
Sbjct: 296 RVVVISYTMLHRLRKSMLEREWALLIIDESHHVRCTKK--TEPGEIQAVLDVASKVKRII 353

Query: 182 LLSGTPSLSR 211
           LLSGTPSLSR
Sbjct: 354 LLSGTPSLSR 363


>ref|NP_196398.2| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
           gi|332003824|gb|AED91207.1| SNF2 and helicase
           domain-containing protein [Arabidopsis thaliana]
          Length = 1190

 Score =  119 bits (298), Expect(2) = 2e-45
 Identities = 56/76 (73%), Positives = 63/76 (82%)
 Frame = +3

Query: 219 RPFDIFHQINILWPGLLGKDKLAFAKTYCSMSSSRTYQGIVYQDFSKGIRLEELNVLLKQ 398
           RPFDIFHQIN+LWPGLLGKDK  FAKTYC +   R  QG ++QDFSKG RL ELN+LL Q
Sbjct: 363 RPFDIFHQINMLWPGLLGKDKYEFAKTYCEVGLVRGIQGKIFQDFSKGTRLLELNILLNQ 422

Query: 399 TVMIRRLKEHVLMQLP 446
           TVMIRRLK+H+L QLP
Sbjct: 423 TVMIRRLKQHLLTQLP 438



 Score = 88.2 bits (217), Expect(2) = 2e-45
 Identities = 42/70 (60%), Positives = 59/70 (84%)
 Frame = +2

Query: 2   KVVVISYKMLHNLKKSISEQKWAVLIVDESHHVRCTKRRSSEAGETQAVLDVSSKINRIV 181
           KVVVISYKML +L+ ++ E++WA+LIVDESHH+RC+K++ S+  E + VLDV+ K+  I+
Sbjct: 295 KVVVISYKMLQHLRTTMLEREWALLIVDESHHLRCSKKK-SDPPEIKTVLDVAEKVKHII 353

Query: 182 LLSGTPSLSR 211
           LLSGTPS+SR
Sbjct: 354 LLSGTPSVSR 363


>ref|XP_002873325.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319162|gb|EFH49584.1| SNF2 domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1194

 Score =  120 bits (300), Expect(2) = 3e-45
 Identities = 57/76 (75%), Positives = 63/76 (82%)
 Frame = +3

Query: 219 RPFDIFHQINILWPGLLGKDKLAFAKTYCSMSSSRTYQGIVYQDFSKGIRLEELNVLLKQ 398
           RPFDIFHQINILWPGLLGK+K  FAKTYC +   R  QG ++QDFSKG RL ELN+LL Q
Sbjct: 363 RPFDIFHQINILWPGLLGKEKYEFAKTYCEVGLVRGMQGKIFQDFSKGTRLLELNILLNQ 422

Query: 399 TVMIRRLKEHVLMQLP 446
           TVMIRRLK+HVL QLP
Sbjct: 423 TVMIRRLKQHVLTQLP 438



 Score = 87.0 bits (214), Expect(2) = 3e-45
 Identities = 42/70 (60%), Positives = 59/70 (84%)
 Frame = +2

Query: 2   KVVVISYKMLHNLKKSISEQKWAVLIVDESHHVRCTKRRSSEAGETQAVLDVSSKINRIV 181
           KVVVISYKML +L+ ++ E++WA+LIVDESHH+RC+K++ S+  E + VL+V+ K+  IV
Sbjct: 295 KVVVISYKMLQHLRTTMLEREWALLIVDESHHLRCSKKK-SDPPEIKTVLNVAEKVKHIV 353

Query: 182 LLSGTPSLSR 211
           LLSGTPS+SR
Sbjct: 354 LLSGTPSISR 363


Top