BLASTX nr result

ID: Atractylodes21_contig00036426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036426
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144627.1| PREDICTED: RING-H2 finger protein ATL18-like...    67   1e-09
gb|AFK48359.1| unknown [Lotus japonicus]                               66   3e-09
ref|XP_002514390.1| conserved hypothetical protein [Ricinus comm...    62   5e-08
ref|XP_002872581.1| ring-H2 finger protein RHA1a [Arabidopsis ly...    60   1e-07
gb|AAC68664.1| RING-H2 finger protein RHA1a [Arabidopsis thalian...    60   2e-07

>ref|XP_004144627.1| PREDICTED: RING-H2 finger protein ATL18-like [Cucumis sativus]
           gi|449500186|ref|XP_004161028.1| PREDICTED: RING-H2
           finger protein ATL18-like [Cucumis sativus]
          Length = 125

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/72 (43%), Positives = 41/72 (56%)
 Frame = +3

Query: 135 CLVDLPIIRFQDLQERRHREVEEMCFICSANYDNDDVVCQLSRCGHVFHSECVGKLIHRK 314
           C V L + RF++LQ     E EE+C +C   +  + +V QL RC HVFH EC+   + R 
Sbjct: 52  CEVKLLVCRFEELQRAVGSE-EEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRN 110

Query: 315 QSDCPFCRSSFF 350
           Q  CP CRS  F
Sbjct: 111 QFTCPLCRSFIF 122


>gb|AFK48359.1| unknown [Lotus japonicus]
          Length = 137

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
 Frame = +3

Query: 6   IMVINLIFSLFVLFPIFRIKTQLFNLL----KDSFSYVYLHHHETDICLVDLPIIRFQDL 173
           + V+ ++F   +L P+  +K  L +L     KD   ++ +        +  LP+ RF+DL
Sbjct: 11  LWVVTIVFYTCILIPLKELKGALASLFGLFSKDVVEFLAV--------ISSLPVARFEDL 62

Query: 174 QERRHREV-------EEMCFICSANYDNDDVVCQLSRCGHVFHSECVGKLIHRKQSDCPF 332
           + +   E        E++C IC   ++ +D V +L R GHVFH  C+ + + R Q  CP 
Sbjct: 63  RRQCCCEGGDDDELREKICSICLVEFEGEDAVSKLERRGHVFHLNCIEQWLDRCQFSCPL 122

Query: 333 CRSSFF 350
           CRS  F
Sbjct: 123 CRSFLF 128


>ref|XP_002514390.1| conserved hypothetical protein [Ricinus communis]
           gi|223546487|gb|EEF47986.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 85

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/72 (37%), Positives = 38/72 (52%)
 Frame = +3

Query: 135 CLVDLPIIRFQDLQERRHREVEEMCFICSANYDNDDVVCQLSRCGHVFHSECVGKLIHRK 314
           C+  +   RF +LQ       E +C IC   ++  D V Q+SRC H+FH +C+ K + R 
Sbjct: 12  CINGVAAARFGELQRCGSGSDENLCCICLVEFEEGDEVSQVSRCMHLFHLDCIAKWLQRH 71

Query: 315 QSDCPFCRSSFF 350
              CP CRS  F
Sbjct: 72  NFTCPLCRSLVF 83


>ref|XP_002872581.1| ring-H2 finger protein RHA1a [Arabidopsis lyrata subsp. lyrata]
           gi|297318418|gb|EFH48840.1| ring-H2 finger protein RHA1a
           [Arabidopsis lyrata subsp. lyrata]
          Length = 159

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
 Frame = +3

Query: 147 LPIIRFQDLQERRHREVEEMCFICSANYDNDDVVCQLSRCGHVFHSECVGK-LIHRKQSD 323
           +P++RF DL      + E+ C IC +++D++D + QL +CGHVFH  C+ + ++   +  
Sbjct: 70  IPVVRFSDLLT----DPEDCCTICLSDFDSNDKIRQLPKCGHVFHQRCLDRWIVDFNKMK 125

Query: 324 CPFCRSSF 347
           CP CR+ F
Sbjct: 126 CPICRNRF 133


>gb|AAC68664.1| RING-H2 finger protein RHA1a [Arabidopsis thaliana]
           gi|21554250|gb|AAM63325.1| RING-H2 finger protein
           RHA1a-like protein [Arabidopsis thaliana]
          Length = 159

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
 Frame = +3

Query: 147 LPIIRFQDLQERRHREVEEMCFICSANYDNDDVVCQLSRCGHVFHSECVGK-LIHRKQSD 323
           +P++RF DL      + E+ C +C +++++DD V QL +CGHVFH  C+ + ++   +  
Sbjct: 70  IPVVRFSDLPT----DPEDCCTVCLSDFESDDKVRQLPKCGHVFHHHCLDRWIVDYNKMK 125

Query: 324 CPFCRSSF 347
           CP CR  F
Sbjct: 126 CPVCRHRF 133


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