BLASTX nr result

ID: Atractylodes21_contig00036352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036352
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331146.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002324414.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002514322.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>ref|XP_002331146.1| predicted protein [Populus trichocarpa] gi|222873229|gb|EEF10360.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/46 (63%), Positives = 32/46 (69%)
 Frame = +1

Query: 112 RLAAHVGGGEEVGRVIKKQCLCSPTLHPGSFRCKHHHSDYVWVGRL 249
           R     GGG  + R I K CLCSPT HPGSFRC+HH SDYVW GR+
Sbjct: 34  RTEVAAGGGSAISRSINK-CLCSPTRHPGSFRCRHHRSDYVWSGRI 78


>ref|XP_002324414.1| predicted protein [Populus trichocarpa] gi|222865848|gb|EEF02979.1|
           predicted protein [Populus trichocarpa]
          Length = 85

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/81 (43%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
 Frame = +1

Query: 40  MCYPYPPAVPCITTGY--YDLEMRIRRLAAHVG---------GGEEVGRVIKKQCLCSPT 186
           MC+P  P VP ++     Y   + ++ +    G         G   V   IKK CLCSPT
Sbjct: 1   MCHP--PGVPWVSRNLVVYRRWLVLQAVETETGHAPTEVAATGSSAVAGSIKK-CLCSPT 57

Query: 187 LHPGSFRCKHHHSDYVWVGRL 249
            HPGSFRC+HH SDYVW GR+
Sbjct: 58  RHPGSFRCRHHRSDYVWGGRI 78


>ref|XP_002514322.1| conserved hypothetical protein [Ricinus communis]
           gi|223546778|gb|EEF48276.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 23/40 (57%), Positives = 27/40 (67%)
 Frame = +1

Query: 130 GGGEEVGRVIKKQCLCSPTLHPGSFRCKHHHSDYVWVGRL 249
           GGG  +     K C+CSPT HPGSFRC+HHH DY W  R+
Sbjct: 53  GGGGSI-----KMCVCSPTRHPGSFRCRHHHVDYAWGRRI 87


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