BLASTX nr result

ID: Atractylodes21_contig00036247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036247
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helica...   130   1e-28
ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helica...   129   2e-28
ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA h...   126   2e-27
emb|CBI36896.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...   124   6e-27

>ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Glycine
           max]
          Length = 1403

 Score =  130 bits (327), Expect = 1e-28
 Identities = 70/94 (74%), Positives = 81/94 (86%), Gaps = 1/94 (1%)
 Frame = -2

Query: 279 IGNSCSIKFMTDGILLRELQNDFLLKQYSTIILDEAHERSLNTDILTGMLSRVIVERQII 100
           IG SCSIKFMTDGILLRE+QND LL++YS +ILDEAHERSLNTDIL GMLSRVI  RQ+I
Sbjct: 436 IGESCSIKFMTDGILLREVQNDILLRRYSVLILDEAHERSLNTDILIGMLSRVIKTRQMI 495

Query: 99  HEQQKAYELSTGKMISPEK-IFPLRLILMSATLR 1
           + +QK   LS G+ +SPEK IFPL+L+LMSATLR
Sbjct: 496 YYEQKKMILS-GESVSPEKMIFPLKLVLMSATLR 528


>ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helicase DHR1-like [Glycine
           max]
          Length = 1380

 Score =  129 bits (324), Expect = 2e-28
 Identities = 69/94 (73%), Positives = 81/94 (86%), Gaps = 1/94 (1%)
 Frame = -2

Query: 279 IGNSCSIKFMTDGILLRELQNDFLLKQYSTIILDEAHERSLNTDILTGMLSRVIVERQII 100
           IG SCSIKFMTDGILLRE+QND LL++YS +ILDEAHERSLNTDIL GMLSRVI  RQ+I
Sbjct: 412 IGESCSIKFMTDGILLREVQNDILLRRYSVLILDEAHERSLNTDILIGMLSRVIKTRQMI 471

Query: 99  HEQQKAYELSTGKMISPEK-IFPLRLILMSATLR 1
           + +Q+   LS G+ ISPEK +FPL+L+LMSATLR
Sbjct: 472 YNEQQKMILS-GENISPEKMVFPLKLVLMSATLR 504


>ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago
           truncatula] gi|355506130|gb|AES87272.1|
           Pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16 [Medicago truncatula]
          Length = 1331

 Score =  126 bits (317), Expect = 2e-27
 Identities = 67/94 (71%), Positives = 81/94 (86%), Gaps = 1/94 (1%)
 Frame = -2

Query: 279 IGNSCSIKFMTDGILLRELQNDFLLKQYSTIILDEAHERSLNTDILTGMLSRVIVERQII 100
           IG +CSIKFMTDGILLRE+QND LL++YS +ILDEAHERSLNTDIL GMLSRVI  RQ I
Sbjct: 365 IGENCSIKFMTDGILLREVQNDILLRRYSVLILDEAHERSLNTDILIGMLSRVIRTRQKI 424

Query: 99  HEQQKAYELSTGKMISPEK-IFPLRLILMSATLR 1
           +++Q+   LS G+ ISP+K +FPL+L+LMSATLR
Sbjct: 425 YDEQQKMVLS-GESISPDKMVFPLKLVLMSATLR 457


>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
          Length = 1098

 Score =  124 bits (312), Expect = 6e-27
 Identities = 68/95 (71%), Positives = 80/95 (84%), Gaps = 1/95 (1%)
 Frame = -2

Query: 282 LIGNSCSIKFMTDGILLRELQNDFLLKQYSTIILDEAHERSLNTDILTGMLSRVIVERQI 103
           +IG+SCSIKFMTDGILLRE+QNDF L++YS IILDEAHERSLNTDIL GMLSRVI  RQ 
Sbjct: 331 MIGDSCSIKFMTDGILLREVQNDFSLRRYSVIILDEAHERSLNTDILIGMLSRVIQVRQK 390

Query: 102 IHEQQKAYELSTGKMISPEKIFP-LRLILMSATLR 1
           ++E+Q+   LS G  ISPE + P L+L+LMSATLR
Sbjct: 391 LYEEQQQMMLS-GVRISPESMVPQLKLVLMSATLR 424


>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
           vinifera]
          Length = 1414

 Score =  124 bits (312), Expect = 6e-27
 Identities = 68/95 (71%), Positives = 80/95 (84%), Gaps = 1/95 (1%)
 Frame = -2

Query: 282 LIGNSCSIKFMTDGILLRELQNDFLLKQYSTIILDEAHERSLNTDILTGMLSRVIVERQI 103
           +IG+SCSIKFMTDGILLRE+QNDF L++YS IILDEAHERSLNTDIL GMLSRVI  RQ 
Sbjct: 450 MIGDSCSIKFMTDGILLREVQNDFSLRRYSVIILDEAHERSLNTDILIGMLSRVIQVRQK 509

Query: 102 IHEQQKAYELSTGKMISPEKIFP-LRLILMSATLR 1
           ++E+Q+   LS G  ISPE + P L+L+LMSATLR
Sbjct: 510 LYEEQQQMMLS-GVRISPESMVPQLKLVLMSATLR 543


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