BLASTX nr result

ID: Atractylodes21_contig00036237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036237
         (1181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|2...   611   e-172
ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|2...   603   e-170
ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249...   601   e-169
ref|XP_002522264.1| replication factor C / DNA polymerase III ga...   588   e-165
ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793...   586   e-165

>ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|222860456|gb|EEE98003.1|
            predicted protein [Populus trichocarpa]
          Length = 1190

 Score =  611 bits (1576), Expect = e-172
 Identities = 307/393 (78%), Positives = 339/393 (86%)
 Frame = -2

Query: 1180 KLRGRDNTRHQNLTQKYMPRTFRDLVGQNLAVQALSNAIAKKKVGLVYVFYGPHGTGKTS 1001
            KL    N RHQNLTQ+YMPRTFRDLVGQNLA QALSNA  ++KVG +YVFYGPHGTGKTS
Sbjct: 442  KLGRNQNGRHQNLTQRYMPRTFRDLVGQNLAAQALSNAAVRRKVGFLYVFYGPHGTGKTS 501

Query: 1000 CARIFARALTCQSLDHPKPCGYCNSCVAHDMGKSRSVREVGPMNNLGYKGIMELIESMVI 821
            CARIF+RAL CQSL+HPKPCGYCNSC++HDMGKSR++REVGP++N  +K I++L+++M+I
Sbjct: 502  CARIFSRALNCQSLEHPKPCGYCNSCISHDMGKSRNIREVGPVSNFDFKSIIDLLDNMII 561

Query: 820  SQLPSQYRVFIIDDCDTLPPDCWSAISKVIDRAPRRMVFVLVNSSLDVLPHIIISRCQKF 641
            SQ PSQYRVFI DDCDTL PDCWSAISKVIDRAPRR+VFVLV SSLDVLPHIIISRCQKF
Sbjct: 562  SQTPSQYRVFIFDDCDTLAPDCWSAISKVIDRAPRRVVFVLVCSSLDVLPHIIISRCQKF 621

Query: 640  FFPKLKDADIIYTLQWIATKEDFEIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRISV 461
            FFPKLKDADIIYTLQWI++KED +IDKDALKLIASRSDGSLRDAEMTLEQLSLLGQ+ISV
Sbjct: 622  FFPKLKDADIIYTLQWISSKEDIDIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQKISV 681

Query: 460  PLVQELVGLIXXXXXXXXXXXXXXXDTVNTVKHLREIMESGVEPLALMSQLATVITDILA 281
            PLVQELVGLI               DTVNTVK+LR IME+GVEPLALMSQLATVITDILA
Sbjct: 682  PLVQELVGLISDEKLVDLLDLAISADTVNTVKNLRVIMETGVEPLALMSQLATVITDILA 741

Query: 280  GSYNFMKERPKRKFFRRQALSKDDMEKLRLALKTLSEAEKQLRMSNDKXXXXXXXXXXXA 101
            GSY+F KERP+RKFFRR  LSKDDMEKLR ALKTLSEAEKQLRMSNDK           A
Sbjct: 742  GSYDFTKERPRRKFFRRNPLSKDDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLA 801

Query: 100  PDQQYVLPTSSTDTSIRHSPLGLNNAGGRDGSR 2
            PDQQY+LP+SST+TS  HSPL LNN GGRD +R
Sbjct: 802  PDQQYLLPSSSTETSFNHSPLALNNMGGRDIAR 834


>ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|222848688|gb|EEE86235.1|
            predicted protein [Populus trichocarpa]
          Length = 1188

 Score =  603 bits (1555), Expect = e-170
 Identities = 302/393 (76%), Positives = 339/393 (86%)
 Frame = -2

Query: 1180 KLRGRDNTRHQNLTQKYMPRTFRDLVGQNLAVQALSNAIAKKKVGLVYVFYGPHGTGKTS 1001
            KL    N RHQNLTQKYMPRTFRDLVGQNL  QALSNA++++KVGL+YVFYGPHGTGKTS
Sbjct: 438  KLGQNHNGRHQNLTQKYMPRTFRDLVGQNLVAQALSNAVSRRKVGLLYVFYGPHGTGKTS 497

Query: 1000 CARIFARALTCQSLDHPKPCGYCNSCVAHDMGKSRSVREVGPMNNLGYKGIMELIESMVI 821
            CARIFARAL CQSL+HPKPCG+CNSC++HDMGKSR++REVGP++N  ++ IM+L+++M++
Sbjct: 498  CARIFARALNCQSLEHPKPCGFCNSCISHDMGKSRNIREVGPVSNFDFESIMDLLDNMIV 557

Query: 820  SQLPSQYRVFIIDDCDTLPPDCWSAISKVIDRAPRRMVFVLVNSSLDVLPHIIISRCQKF 641
             Q+PS YRVFI DDCD+L PDCWSAI KVIDRAPRR+VFVLV SSLDVLPHIIISRCQKF
Sbjct: 558  YQIPSLYRVFIFDDCDSLSPDCWSAILKVIDRAPRRVVFVLVCSSLDVLPHIIISRCQKF 617

Query: 640  FFPKLKDADIIYTLQWIATKEDFEIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRISV 461
            FFPKLKDADIIYTLQWI++KED +IDKDALKLIASRSDGSLRDAEMTLEQLSLLGQ+ISV
Sbjct: 618  FFPKLKDADIIYTLQWISSKEDIDIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQKISV 677

Query: 460  PLVQELVGLIXXXXXXXXXXXXXXXDTVNTVKHLREIMESGVEPLALMSQLATVITDILA 281
            PLVQELVGLI               DTVNTVK+LR IME+GVEPLALMSQLATVITDILA
Sbjct: 678  PLVQELVGLISDEKLVDLLDLALSADTVNTVKNLRVIMETGVEPLALMSQLATVITDILA 737

Query: 280  GSYNFMKERPKRKFFRRQALSKDDMEKLRLALKTLSEAEKQLRMSNDKXXXXXXXXXXXA 101
            GSY+F KERP+RKFFRR+ LSK+DMEKLR ALKTLSEAEKQLRMSNDK           A
Sbjct: 738  GSYDFTKERPRRKFFRRKPLSKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLA 797

Query: 100  PDQQYVLPTSSTDTSIRHSPLGLNNAGGRDGSR 2
            PDQQY+LP+SST+TS  HSPL  NN GGRD SR
Sbjct: 798  PDQQYLLPSSSTETSFNHSPLAQNNMGGRDISR 830


>ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249702 [Vitis vinifera]
          Length = 1161

 Score =  601 bits (1549), Expect = e-169
 Identities = 303/386 (78%), Positives = 333/386 (86%)
 Frame = -2

Query: 1180 KLRGRDNTRHQNLTQKYMPRTFRDLVGQNLAVQALSNAIAKKKVGLVYVFYGPHGTGKTS 1001
            K RG    RHQNLTQKYMPRTF  LVGQNL  QALSNA+ K+KVG +YVFYGPHGTGKTS
Sbjct: 446  KFRGYRQDRHQNLTQKYMPRTFGGLVGQNLVAQALSNAVVKRKVGFLYVFYGPHGTGKTS 505

Query: 1000 CARIFARALTCQSLDHPKPCGYCNSCVAHDMGKSRSVREVGPMNNLGYKGIMELIESMVI 821
            CARIFARAL C S++HPKPCG+CNSC+AHDMGKSR++REVGP++NL ++GIM L+++++ 
Sbjct: 506  CARIFARALNCPSMEHPKPCGFCNSCIAHDMGKSRNIREVGPVSNLDFEGIMNLLDNVIA 565

Query: 820  SQLPSQYRVFIIDDCDTLPPDCWSAISKVIDRAPRRMVFVLVNSSLDVLPHIIISRCQKF 641
            SQLP+QYRVFI DDCDTL PDCWSAISK+IDRAPRRMVFVLV+S+LDVLPHIIISRCQKF
Sbjct: 566  SQLPTQYRVFIFDDCDTLSPDCWSAISKLIDRAPRRMVFVLVSSTLDVLPHIIISRCQKF 625

Query: 640  FFPKLKDADIIYTLQWIATKEDFEIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRISV 461
            FFPKLKDADIIYTLQWIATKED EIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRISV
Sbjct: 626  FFPKLKDADIIYTLQWIATKEDLEIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRISV 685

Query: 460  PLVQELVGLIXXXXXXXXXXXXXXXDTVNTVKHLREIMESGVEPLALMSQLATVITDILA 281
            PLVQELVGLI               DTVNTVK+LREIME+GVEPLALMSQLATVITDILA
Sbjct: 686  PLVQELVGLISDEKLVDLLDLALSADTVNTVKNLREIMETGVEPLALMSQLATVITDILA 745

Query: 280  GSYNFMKERPKRKFFRRQALSKDDMEKLRLALKTLSEAEKQLRMSNDKXXXXXXXXXXXA 101
            GSY+F KER +RKFFRRQALSK+DMEKLR ALKTLSEAEKQLRMSNDK           A
Sbjct: 746  GSYDFTKERLRRKFFRRQALSKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLA 805

Query: 100  PDQQYVLPTSSTDTSIRHSPLGLNNA 23
            PDQQY+LP+SS DTS  HSPL  NN+
Sbjct: 806  PDQQYMLPSSSADTSFNHSPLVPNNS 831


>ref|XP_002522264.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223538517|gb|EEF40122.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 1105

 Score =  588 bits (1515), Expect = e-165
 Identities = 295/378 (78%), Positives = 326/378 (86%)
 Frame = -2

Query: 1180 KLRGRDNTRHQNLTQKYMPRTFRDLVGQNLAVQALSNAIAKKKVGLVYVFYGPHGTGKTS 1001
            KLR   N+RHQN TQKYMPRTFRDLVGQNL  QALSNA+ ++KVGL+YVFYGPHGTGKTS
Sbjct: 444  KLRRNHNSRHQNFTQKYMPRTFRDLVGQNLVAQALSNAVVRRKVGLLYVFYGPHGTGKTS 503

Query: 1000 CARIFARALTCQSLDHPKPCGYCNSCVAHDMGKSRSVREVGPMNNLGYKGIMELIESMVI 821
            CARIFARAL CQSL+HPKPCGYCNSC++HDMGKSR++REVGP++N  +  I++L+++M+I
Sbjct: 504  CARIFARALNCQSLEHPKPCGYCNSCISHDMGKSRNIREVGPVSNFDFGNIVDLLDNMII 563

Query: 820  SQLPSQYRVFIIDDCDTLPPDCWSAISKVIDRAPRRMVFVLVNSSLDVLPHIIISRCQKF 641
            S LPSQYRVFI D CDTL  DCWSAISKVIDRAPRR+VFVLV+SSLDVLPHIIISRCQKF
Sbjct: 564  SHLPSQYRVFIFDGCDTLSSDCWSAISKVIDRAPRRVVFVLVSSSLDVLPHIIISRCQKF 623

Query: 640  FFPKLKDADIIYTLQWIATKEDFEIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRISV 461
            FFPKLKDADIIYTLQWIA+KED +IDKDALKLIASRSDGSLRDA+MTLEQLSLLG +ISV
Sbjct: 624  FFPKLKDADIIYTLQWIASKEDIDIDKDALKLIASRSDGSLRDAQMTLEQLSLLGLKISV 683

Query: 460  PLVQELVGLIXXXXXXXXXXXXXXXDTVNTVKHLREIMESGVEPLALMSQLATVITDILA 281
            PLVQELVGLI               DTVNTVKHLR IME+GVEPLALMSQLATVITDILA
Sbjct: 684  PLVQELVGLISDEKLVDLLDLALSADTVNTVKHLRVIMETGVEPLALMSQLATVITDILA 743

Query: 280  GSYNFMKERPKRKFFRRQALSKDDMEKLRLALKTLSEAEKQLRMSNDKXXXXXXXXXXXA 101
            GSYNF KER +RKFFRRQ LSK+DMEKLR ALKTLSEAEKQLRMSNDK           A
Sbjct: 744  GSYNFTKERHRRKFFRRQPLSKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLA 803

Query: 100  PDQQYVLPTSSTDTSIRH 47
            PDQQY+LP+SST+TS  H
Sbjct: 804  PDQQYMLPSSSTETSFNH 821


>ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max]
          Length = 1191

 Score =  586 bits (1511), Expect = e-165
 Identities = 298/393 (75%), Positives = 332/393 (84%)
 Frame = -2

Query: 1180 KLRGRDNTRHQNLTQKYMPRTFRDLVGQNLAVQALSNAIAKKKVGLVYVFYGPHGTGKTS 1001
            KLRG  ++RHQ+LTQKYMPRTFRD+VGQNL  QALSNA+ KKKVGL+YVFYGPHGTGKTS
Sbjct: 446  KLRGNRHSRHQSLTQKYMPRTFRDMVGQNLVAQALSNAVMKKKVGLLYVFYGPHGTGKTS 505

Query: 1000 CARIFARALTCQSLDHPKPCGYCNSCVAHDMGKSRSVREVGPMNNLGYKGIMELIESMVI 821
             ARIFARAL C S +HPKPCG+CN CVAHDMGKSR++REVGP++N  ++ IMEL+++M++
Sbjct: 506  SARIFARALNCNSSEHPKPCGFCNYCVAHDMGKSRNIREVGPVSNFDFESIMELLDNMIV 565

Query: 820  SQLPSQYRVFIIDDCDTLPPDCWSAISKVIDRAPRRMVFVLVNSSLDVLPHIIISRCQKF 641
            SQLPS YRVFI DDCDTL  DCW+AISKVIDRAPRR+VF+LV+SSLDVLPHIIISRCQKF
Sbjct: 566  SQLPSHYRVFIFDDCDTLSTDCWNAISKVIDRAPRRVVFILVSSSLDVLPHIIISRCQKF 625

Query: 640  FFPKLKDADIIYTLQWIATKEDFEIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRISV 461
            FFPKLKDADIIYTL+WIATKE  EIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRISV
Sbjct: 626  FFPKLKDADIIYTLEWIATKEGLEIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRISV 685

Query: 460  PLVQELVGLIXXXXXXXXXXXXXXXDTVNTVKHLREIMESGVEPLALMSQLATVITDILA 281
            PLVQELVGLI               DTVNTVK+LR IME+GVEPLALMSQLATVITDILA
Sbjct: 686  PLVQELVGLISDEKLVDLLDLALSADTVNTVKNLRVIMETGVEPLALMSQLATVITDILA 745

Query: 280  GSYNFMKERPKRKFFRRQALSKDDMEKLRLALKTLSEAEKQLRMSNDKXXXXXXXXXXXA 101
            G+Y+F K+R +RKFFRR  LSK+DMEKLR ALKTLSEAEKQLRMSNDK           A
Sbjct: 746  GTYDFRKDRRRRKFFRRPLLSKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLA 805

Query: 100  PDQQYVLPTSSTDTSIRHSPLGLNNAGGRDGSR 2
            PDQQYVLPTSS D S  HSP  L +A  R+ +R
Sbjct: 806  PDQQYVLPTSS-DNSFNHSPFALKDADAREAAR 837


Top