BLASTX nr result

ID: Atractylodes21_contig00036231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036231
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279752.2| PREDICTED: WD repeat-containing protein 18-l...   114   1e-23
emb|CBI15639.3| unnamed protein product [Vitis vinifera]              114   1e-23
ref|XP_002322240.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_002511209.1| WD-repeat protein, putative [Ricinus communi...   105   5e-21
emb|CAN81788.1| hypothetical protein VITISV_026009 [Vitis vinifera]    99   3e-19

>ref|XP_002279752.2| PREDICTED: WD repeat-containing protein 18-like [Vitis vinifera]
          Length = 476

 Score =  114 bits (284), Expect = 1e-23
 Identities = 61/118 (51%), Positives = 72/118 (61%)
 Frame = -1

Query: 356 KTWHAHNSALTCLAFSDDASLLISGSEDGMIVVWPMLSLLDEXXXXXXXXXXXXXTDHKS 177
           KTW AH+ +LT + FSDD SLLISGS+DGMI VW M+SLLD               +H S
Sbjct: 123 KTWRAHHKSLTSMVFSDDDSLLISGSDDGMIRVWSMISLLDIADCGRFPSLFHSLLEHTS 182

Query: 176 FITGLLPXXXXXXXXXXXXSLDGTCKVWDLVKGTLLQACSFVQSITAAVLDPAERFLF 3
            ITGLL             SLDGTCKVWDL++G LL+   F  +ITA VLDP E+ LF
Sbjct: 183 SITGLLSISGSSSPVLVSSSLDGTCKVWDLIRGRLLRTRVFPTAITAIVLDPGEQLLF 240


>emb|CBI15639.3| unnamed protein product [Vitis vinifera]
          Length = 281

 Score =  114 bits (284), Expect = 1e-23
 Identities = 61/118 (51%), Positives = 72/118 (61%)
 Frame = -1

Query: 356 KTWHAHNSALTCLAFSDDASLLISGSEDGMIVVWPMLSLLDEXXXXXXXXXXXXXTDHKS 177
           KTW AH+ +LT + FSDD SLLISGS+DGMI VW M+SLLD               +H S
Sbjct: 123 KTWRAHHKSLTSMVFSDDDSLLISGSDDGMIRVWSMISLLDIADCGRFPSLFHSLLEHTS 182

Query: 176 FITGLLPXXXXXXXXXXXXSLDGTCKVWDLVKGTLLQACSFVQSITAAVLDPAERFLF 3
            ITGLL             SLDGTCKVWDL++G LL+   F  +ITA VLDP E+ LF
Sbjct: 183 SITGLLSISGSSSPVLVSSSLDGTCKVWDLIRGRLLRTRVFPTAITAIVLDPGEQLLF 240


>ref|XP_002322240.1| predicted protein [Populus trichocarpa] gi|222869236|gb|EEF06367.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  105 bits (262), Expect = 4e-21
 Identities = 55/118 (46%), Positives = 68/118 (57%)
 Frame = -1

Query: 356 KTWHAHNSALTCLAFSDDASLLISGSEDGMIVVWPMLSLLDEXXXXXXXXXXXXXTDHKS 177
           KTW AH+ +L CL FS+D SLLISGSEDG++ VW M+SLLD              ++H S
Sbjct: 124 KTWRAHSRSLKCLIFSNDDSLLISGSEDGVVCVWSMVSLLDTEDFGSSCSLLHYSSEHTS 183

Query: 176 FITGLLPXXXXXXXXXXXXSLDGTCKVWDLVKGTLLQACSFVQSITAAVLDPAERFLF 3
            +TGLL             SLD TCK WD+  G L+Q   +   ITA V DPAE+ LF
Sbjct: 184 SVTGLLTTSGIANSTFISSSLDATCKAWDVFSGRLIQTQDYPLGITAIVTDPAEQLLF 241


>ref|XP_002511209.1| WD-repeat protein, putative [Ricinus communis]
           gi|223550324|gb|EEF51811.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 471

 Score =  105 bits (261), Expect = 5e-21
 Identities = 54/118 (45%), Positives = 72/118 (61%)
 Frame = -1

Query: 356 KTWHAHNSALTCLAFSDDASLLISGSEDGMIVVWPMLSLLDEXXXXXXXXXXXXXTDHKS 177
           KTW AH+S+L C+ FS+D SLLISGS+DG+I +W M+SLLD              ++HKS
Sbjct: 121 KTWGAHHSSLKCMVFSNDDSLLISGSDDGIICMWSMISLLDMENSGSSSSLLHYSSEHKS 180

Query: 176 FITGLLPXXXXXXXXXXXXSLDGTCKVWDLVKGTLLQACSFVQSITAAVLDPAERFLF 3
            I+GLL             SLD TCK WDLV G  +Q+  +  +ITA +L P ++FLF
Sbjct: 181 SISGLLTTSGNSNSTFISSSLDATCKAWDLVSGEPIQSQEYPLAITAIILHPVDQFLF 238


>emb|CAN81788.1| hypothetical protein VITISV_026009 [Vitis vinifera]
          Length = 503

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 61/145 (42%), Positives = 72/145 (49%), Gaps = 27/145 (18%)
 Frame = -1

Query: 356 KTWHAHNSALTCLAFSDDASLLISGSEDGMIVVWPMLS---------------------- 243
           KTW AH+ +LT + FSDD SLLISGS+DGMI VW M+S                      
Sbjct: 123 KTWRAHHKSLTSMVFSDDDSLLISGSDDGMIRVWSMISKNKRFCLFLEKFEMIHFCELLI 182

Query: 242 -----LLDEXXXXXXXXXXXXXTDHKSFITGLLPXXXXXXXXXXXXSLDGTCKVWDLVKG 78
                LLD               +H S ITGLL             SLDGTCKVWDL++G
Sbjct: 183 NLDGSLLDIADCGRFPSLFHSLLEHTSSITGLLSISGSSSPVLVSSSLDGTCKVWDLIRG 242

Query: 77  TLLQACSFVQSITAAVLDPAERFLF 3
            LL+   F  +ITA VLDP E+ LF
Sbjct: 243 RLLRTRVFPTAITAIVLDPGEQLLF 267


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