BLASTX nr result

ID: Atractylodes21_contig00036225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036225
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002872326.1| hypothetical protein ARALYDRAFT_489660 [Arab...    94   2e-17
ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...    93   3e-17
ref|XP_003593448.1| Pre-mRNA-splicing factor SYF1 [Medicago trun...    92   4e-17
ref|XP_003545847.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...    91   7e-17
ref|NP_198226.1| pre-mRNA-splicing factor SYF1 [Arabidopsis thal...    91   1e-16

>ref|XP_002872326.1| hypothetical protein ARALYDRAFT_489660 [Arabidopsis lyrata subsp.
           lyrata] gi|297318163|gb|EFH48585.1| hypothetical protein
           ARALYDRAFT_489660 [Arabidopsis lyrata subsp. lyrata]
          Length = 928

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 44/57 (77%), Positives = 48/57 (84%)
 Frame = -3

Query: 172 MSISSDLYPSHKDLPYEEELLRNPSRFKLWWGYLIAQTESPFKKRAVIYERALKALP 2
           M+IS DLYPS +DL YEEELLRNP   KLWW YLIA+ ESPFKKR +IYERALKALP
Sbjct: 1   MAISKDLYPSQEDLLYEEELLRNPFSLKLWWRYLIAKAESPFKKRFIIYERALKALP 57


>ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cucumis sativus]
          Length = 912

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/57 (77%), Positives = 47/57 (82%)
 Frame = -3

Query: 172 MSISSDLYPSHKDLPYEEELLRNPSRFKLWWGYLIAQTESPFKKRAVIYERALKALP 2
           MSIS DLYPS  DL YEEELLRNP   KLWW YLIA+ E+PFKKR +IYERALKALP
Sbjct: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAEAPFKKRFIIYERALKALP 57


>ref|XP_003593448.1| Pre-mRNA-splicing factor SYF1 [Medicago truncatula]
           gi|355482496|gb|AES63699.1| Pre-mRNA-splicing factor
           SYF1 [Medicago truncatula]
          Length = 925

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/56 (76%), Positives = 48/56 (85%)
 Frame = -3

Query: 169 SISSDLYPSHKDLPYEEELLRNPSRFKLWWGYLIAQTESPFKKRAVIYERALKALP 2
           +ISSDLYPS  DL YEEELLRNP   KLWW YLIA+++SPFKKR +IYERALKALP
Sbjct: 3   AISSDLYPSEDDLVYEEELLRNPFSLKLWWRYLIARSDSPFKKRFIIYERALKALP 58


>ref|XP_003545847.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Glycine max]
          Length = 918

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 43/57 (75%), Positives = 48/57 (84%)
 Frame = -3

Query: 172 MSISSDLYPSHKDLPYEEELLRNPSRFKLWWGYLIAQTESPFKKRAVIYERALKALP 2
           M+I+ DLYPS  DL YEEELLRNP   KLWW YLIA++E+PFKKR VIYERALKALP
Sbjct: 1   MAIAQDLYPSEDDLLYEEELLRNPFSLKLWWRYLIARSEAPFKKRFVIYERALKALP 57


>ref|NP_198226.1| pre-mRNA-splicing factor SYF1 [Arabidopsis thaliana]
           gi|7682783|gb|AAF67364.1| Hypothetical protein T32B20.g
           [Arabidopsis thaliana] gi|332006447|gb|AED93830.1|
           pre-mRNA-splicing factor SYF1 [Arabidopsis thaliana]
          Length = 917

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/57 (75%), Positives = 47/57 (82%)
 Frame = -3

Query: 172 MSISSDLYPSHKDLPYEEELLRNPSRFKLWWGYLIAQTESPFKKRAVIYERALKALP 2
           M+IS DLYPS +DL YEEELLRN    KLWW YLIA+ ESPFKKR +IYERALKALP
Sbjct: 1   MAISKDLYPSQEDLLYEEELLRNQFSLKLWWRYLIAKAESPFKKRFIIYERALKALP 57


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