BLASTX nr result

ID: Atractylodes21_contig00036182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036182
         (941 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD26953.1| putative non-LTR retrolelement reverse transcript...   102   1e-19
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   102   1e-19
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...   100   5e-19
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...   100   6e-19
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...   100   6e-19

>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 323

 Score =  102 bits (255), Expect = 1e-19
 Identities = 57/165 (34%), Positives = 91/165 (55%)
 Frame = +2

Query: 77  FSPKAVWWSLLPSVEDVEWYDTVWPKVLIPKHSFILWLAVRNGLATQEKLLSWKHIPPDV 256
           FS    W +L P    V W  +VW K  IPKH+FI W+A    L T+++L  W    P V
Sbjct: 136 FSASKTWTALNPDGVLVPWQKSVWFKDRIPKHAFICWVAAWKRLHTRDRLTQWGLNIPTV 195

Query: 257 CCSFCGLVPDSVLHLFFLCEFSKGVWVMMREAAGINGMPDDWGGILAYVKSISNKRSVNY 436
           C   C +V ++  HLFF C+FS  +W      AG+   P  +G IL ++KS S+ ++++ 
Sbjct: 196 CV-LCNVVDETHDHLFFQCQFSNEIWSFFMIRAGMT-PPHLFGPILLWLKSASSSKNLS- 252

Query: 437 CVVRLILAASVYHLWRERNRRIFEKCRMGKEELVRKIMGEVKLKL 571
            +++L+  ASVY +WRERN RI          +++++   ++ +L
Sbjct: 253 LIIKLLFQASVYLIWRERNCRIHTTHSRTPPTIIKEVQQLIRARL 297


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  102 bits (254), Expect = 1e-19
 Identities = 60/159 (37%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
 Frame = +2

Query: 32  KDKVMWVNNDGSTCDFSPKAVWWSLLPSVEDVEWYDTVWPKVLIPKHSFILWLAVRNGLA 211
           KD+++W+  D     FS K  W  L    + VEW+D VW K  +P+HSF+LW+AV+  L 
Sbjct: 311 KDELVWL--DSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLT 368

Query: 212 TQEKLLSWKHIPPDVCCSFCGLVPDSVLHLFFLCEFSKGVWVMMREAAGINGMPDDWGGI 391
           TQ+KL  +    P+  CS C    +   HLFF C ++K +W  + +   I  M   W   
Sbjct: 369 TQDKLHRFGIHGPN-RCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDEW 427

Query: 392 LAYVK-SISNKRSVNYCVVRLILAASVYHLWRERNRRIF 505
           + +   S   K  VN+   +L  AA+VYH+W+ERN RIF
Sbjct: 428 IRWATVSWHGKSFVNFS-CKLSFAATVYHVWQERNARIF 465


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score =  100 bits (249), Expect = 5e-19
 Identities = 59/159 (37%), Positives = 86/159 (54%), Gaps = 1/159 (0%)
 Frame = +2

Query: 32   KDKVMWVNNDGSTCDFSPKAVWWSLLPSVEDVEWYDTVWPKVLIPKHSFILWLAVRNGLA 211
            KD+++W+  D     F  K  W  L    + VEW+D VW K  +P+HSF+LW+AV+  L 
Sbjct: 1184 KDEIVWL--DSPNHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLT 1241

Query: 212  TQEKLLSWKHIPPDVCCSFCGLVPDSVLHLFFLCEFSKGVWVMMREAAGINGMPDDWGGI 391
            TQ+KL  +    P+  CS C    +   HLFF C ++K +W  + +   I  M   W   
Sbjct: 1242 TQDKLYRFGIHGPN-RCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDEW 1300

Query: 392  LAYVK-SISNKRSVNYCVVRLILAASVYHLWRERNRRIF 505
            + +   S   K  VN+   +L  AA+VYH+W+ERN RIF
Sbjct: 1301 IRWATVSWHGKSFVNFS-RKLSFAATVYHVWQERNARIF 1338


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score =  100 bits (248), Expect = 6e-19
 Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 1/159 (0%)
 Frame = +2

Query: 32   KDKVMWVNNDGSTCDFSPKAVWWSLLPSVEDVEWYDTVWPKVLIPKHSFILWLAVRNGLA 211
            KD+++W+  D     FS K  W  L    + VEW+D VW K  +P+HSF+LW+ V+  L 
Sbjct: 844  KDEIIWL--DSPNHRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLT 901

Query: 212  TQEKLLSWKHIPPDVCCSFCGLVPDSVLHLFFLCEFSKGVWVMMREAAGINGMPDDWGGI 391
            TQ+KL  +    P+  CS C    +   HLFF C ++K +W  + +   I  M   W   
Sbjct: 902  TQDKLHRFGIHGPN-RCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDEW 960

Query: 392  LAYVK-SISNKRSVNYCVVRLILAASVYHLWRERNRRIF 505
            + +   S   K  +N+   +L  AA+VYH+W+ERN RIF
Sbjct: 961  IRWATVSWHGKSFINFS-RKLSFAATVYHVWQERNARIF 998


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score =  100 bits (248), Expect = 6e-19
 Identities = 59/159 (37%), Positives = 85/159 (53%), Gaps = 1/159 (0%)
 Frame = +2

Query: 32  KDKVMWVNNDGSTCDFSPKAVWWSLLPSVEDVEWYDTVWPKVLIPKHSFILWLAVRNGLA 211
           KD+++W+  D     FS K  W  L      VEW+D VW K  +P+HSF+LW+ V+  L 
Sbjct: 129 KDEIVWL--DSPNHRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLT 186

Query: 212 TQEKLLSWKHIPPDVCCSFCGLVPDSVLHLFFLCEFSKGVWVMMREAAGINGMPDDWGGI 391
           TQ+KL  +    P+  CS C    +   HLFF C ++K +W  + +   I  M   W   
Sbjct: 187 TQDKLHRFGIHGPN-RCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDEW 245

Query: 392 LAYVK-SISNKRSVNYCVVRLILAASVYHLWRERNRRIF 505
           + +   S   K  VN+   +L  AA+VYH+W+ERN RIF
Sbjct: 246 IRWATVSWHGKSFVNFS-RKLSFAATVYHVWQERNARIF 283


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