BLASTX nr result

ID: Atractylodes21_contig00036154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036154
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28088.3| unnamed protein product [Vitis vinifera]              245   2e-63
ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-...   245   2e-63
emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]   243   1e-62
ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative...   241   3e-62
ref|XP_003620513.1| DNA mismatch repair protein Msh6-2 [Medicago...   240   8e-62

>emb|CBI28088.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score =  245 bits (626), Expect = 2e-63
 Identities = 119/158 (75%), Positives = 138/158 (87%)
 Frame = -3

Query: 475  CMAMSRPVIAPRSDSSGFSQGSKGPTLHMRGLCHPYALGESEGTPVPNDLCLGDNEFGYN 296
            C AMSRPVI P S+ +  S  ++GP L +RGL HP+A+GE+ G PVPND+ LG++  G +
Sbjct: 795  CGAMSRPVILPHSEPATLSGETRGPLLKIRGLWHPFAIGENGGLPVPNDIHLGEDTDGNH 854

Query: 295  PRTLLLTGPNMGGKSTLLRATCLVVILAQLGSYVPCEMCVLSPVDIIFTRLGATDRIMTG 116
            PRTLLLTGPNMGGKSTLLRATCL VILAQLGSYVPC+MC+LS VD++FTRLGATDRIMTG
Sbjct: 855  PRTLLLTGPNMGGKSTLLRATCLAVILAQLGSYVPCKMCILSLVDVVFTRLGATDRIMTG 914

Query: 115  ESTFLVECTETASVLQNATQDSLVILDELGRGTSTFDG 2
            ESTF +ECTETASVL+NATQDSLV+LDELGRGTSTFDG
Sbjct: 915  ESTFFIECTETASVLRNATQDSLVLLDELGRGTSTFDG 952


>ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
          Length = 1122

 Score =  245 bits (626), Expect = 2e-63
 Identities = 119/158 (75%), Positives = 138/158 (87%)
 Frame = -3

Query: 475  CMAMSRPVIAPRSDSSGFSQGSKGPTLHMRGLCHPYALGESEGTPVPNDLCLGDNEFGYN 296
            C AMSRPVI P S+ +  S  ++GP L +RGL HP+A+GE+ G PVPND+ LG++  G +
Sbjct: 791  CGAMSRPVILPHSEPATLSGETRGPLLKIRGLWHPFAIGENGGLPVPNDIHLGEDTDGNH 850

Query: 295  PRTLLLTGPNMGGKSTLLRATCLVVILAQLGSYVPCEMCVLSPVDIIFTRLGATDRIMTG 116
            PRTLLLTGPNMGGKSTLLRATCL VILAQLGSYVPC+MC+LS VD++FTRLGATDRIMTG
Sbjct: 851  PRTLLLTGPNMGGKSTLLRATCLAVILAQLGSYVPCKMCILSLVDVVFTRLGATDRIMTG 910

Query: 115  ESTFLVECTETASVLQNATQDSLVILDELGRGTSTFDG 2
            ESTF +ECTETASVL+NATQDSLV+LDELGRGTSTFDG
Sbjct: 911  ESTFFIECTETASVLRNATQDSLVLLDELGRGTSTFDG 948


>emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]
          Length = 1090

 Score =  243 bits (620), Expect = 1e-62
 Identities = 118/158 (74%), Positives = 137/158 (86%)
 Frame = -3

Query: 475  CMAMSRPVIAPRSDSSGFSQGSKGPTLHMRGLCHPYALGESEGTPVPNDLCLGDNEFGYN 296
            C AMSRPVI P S+ +  S  ++GP L + GL HP+A+GE+ G PVPND+ LG++  G +
Sbjct: 759  CGAMSRPVILPHSEPATLSGETRGPLLKIXGLWHPFAIGENGGLPVPNDIHLGEDTDGNH 818

Query: 295  PRTLLLTGPNMGGKSTLLRATCLVVILAQLGSYVPCEMCVLSPVDIIFTRLGATDRIMTG 116
            PRTLLLTGPNMGGKSTLLRATCL VILAQLGSYVPC+MC+LS VD++FTRLGATDRIMTG
Sbjct: 819  PRTLLLTGPNMGGKSTLLRATCLAVILAQLGSYVPCKMCILSLVDVVFTRLGATDRIMTG 878

Query: 115  ESTFLVECTETASVLQNATQDSLVILDELGRGTSTFDG 2
            ESTF +ECTETASVL+NATQDSLV+LDELGRGTSTFDG
Sbjct: 879  ESTFFIECTETASVLRNATQDSLVLLDELGRGTSTFDG 916


>ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis]
            gi|223546788|gb|EEF48286.1| DNA mismatch repair protein
            MSH6-2, putative [Ricinus communis]
          Length = 1089

 Score =  241 bits (616), Expect = 3e-62
 Identities = 123/156 (78%), Positives = 133/156 (85%)
 Frame = -3

Query: 469  AMSRPVIAPRSDSSGFSQGSKGPTLHMRGLCHPYALGESEGTPVPNDLCLGDNEFGYNPR 290
            +MSRPVI P S SS F Q   GP L +RGL HP+ALGE+ G PVPNDL LG++  GY PR
Sbjct: 771  SMSRPVILPESKSSMFGQDKGGPVLKIRGLWHPFALGENGGMPVPNDLHLGEDLDGYLPR 830

Query: 289  TLLLTGPNMGGKSTLLRATCLVVILAQLGSYVPCEMCVLSPVDIIFTRLGATDRIMTGES 110
            TLLLTGPNMGGKSTLLRATCL VILAQLG +VP E CVLS VDIIFTRLGATDRIMTGES
Sbjct: 831  TLLLTGPNMGGKSTLLRATCLAVILAQLGCFVPSEKCVLSLVDIIFTRLGATDRIMTGES 890

Query: 109  TFLVECTETASVLQNATQDSLVILDELGRGTSTFDG 2
            TF +ECTETASVL+NATQDSLV+LDELGRGTSTFDG
Sbjct: 891  TFFIECTETASVLKNATQDSLVLLDELGRGTSTFDG 926


>ref|XP_003620513.1| DNA mismatch repair protein Msh6-2 [Medicago truncatula]
            gi|355495528|gb|AES76731.1| DNA mismatch repair protein
            Msh6-2 [Medicago truncatula]
          Length = 1160

 Score =  240 bits (613), Expect = 8e-62
 Identities = 122/158 (77%), Positives = 133/158 (84%)
 Frame = -3

Query: 475  CMAMSRPVIAPRSDSSGFSQGSKGPTLHMRGLCHPYALGESEGTPVPNDLCLGDNEFGYN 296
            C  MSRPVI P S S+  S+ S  P L M+GL HP+ALGE+   PVPND+ LG+NE G++
Sbjct: 841  CGTMSRPVIVPTSKST--SKDSGAPVLKMKGLWHPFALGETGREPVPNDMILGENEGGHH 898

Query: 295  PRTLLLTGPNMGGKSTLLRATCLVVILAQLGSYVPCEMCVLSPVDIIFTRLGATDRIMTG 116
            PRTLLLTGPNMGGKSTLLRATCL VI+AQLG YVPCE CVLS VDIIFTRLGATDRIM G
Sbjct: 899  PRTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYVPCENCVLSVVDIIFTRLGATDRIMAG 958

Query: 115  ESTFLVECTETASVLQNATQDSLVILDELGRGTSTFDG 2
            ESTF +ECTETASVL NATQDSLVILDELGRGTSTFDG
Sbjct: 959  ESTFFIECTETASVLHNATQDSLVILDELGRGTSTFDG 996


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