BLASTX nr result
ID: Atractylodes21_contig00036033
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00036033
(786 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEI98626.1| hypothetical protein 111O18.13 [Coffea canephora] 175 1e-41
gb|AAG01118.1|AF273333_3 BAC19.3 [Solanum lycopersicum] 174 3e-41
ref|XP_003611972.1| Transcription initiation factor IIB [Medicag... 173 3e-41
ref|XP_002867001.1| transcription factor IIB family protein [Ara... 173 4e-41
ref|XP_002521582.1| RNA polymerase II transcription factor, puta... 173 4e-41
>gb|AEI98626.1| hypothetical protein 111O18.13 [Coffea canephora]
Length = 526
Score = 175 bits (443), Expect = 1e-41
Identities = 99/164 (60%), Positives = 109/164 (66%), Gaps = 3/164 (1%)
Frame = -2
Query: 785 QELATHIGEVVINKCFCTRRNPXXXXXXXXXXXSQLEDKRKTQAEICKVTGLTEVTLRKV 606
QELATHIGEVVINKCFCTRRNP QLEDKRKTQAEICKVTGLTEVTLRKV
Sbjct: 263 QELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKV 322
Query: 605 YKELLENWDDLLPSNYTPAIPPEKAFPTATIASGRSSSTPRIN-DGIEAEIKPVESRDSS 429
YKELLENWDDLLPSNY+P +PPEKAFP ATIASGR SSTPR + + + K ES++
Sbjct: 323 YKELLENWDDLLPSNYSPVVPPEKAFPMATIASGR-SSTPRADLVEVPSSDKQTESKNPR 381
Query: 428 NEPWKFQSQNATNSQEMDVDGGIIISEELEKKRNTQLW--PPPV 303
A N +E + I S+ L R LW PPV
Sbjct: 382 TSDVLDTCHVAKNKEETENRDSIHRSQSLPMHRTPILWKSQPPV 425
>gb|AAG01118.1|AF273333_3 BAC19.3 [Solanum lycopersicum]
Length = 425
Score = 174 bits (440), Expect = 3e-41
Identities = 105/195 (53%), Positives = 122/195 (62%), Gaps = 10/195 (5%)
Frame = -2
Query: 785 QELATHIGEVVINKCFCTRRNPXXXXXXXXXXXSQLEDKRKTQAEICKVTGLTEVTLRKV 606
QELATHIGEV+INKCFCTRRNP QLEDKRKTQAEICKVTGLTEVTLRKV
Sbjct: 247 QELATHIGEVIINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKV 306
Query: 605 YKELLENWDDLLPSNYTPAIPPEKAFPTATIASGRSSSTPRIN--DGIEAE-IKPVESRD 435
YKELLENWDDLLPS+Y P +PPEKAFP+ATIA+GR SSTPR++ +G +E KPV+ D
Sbjct: 307 YKELLENWDDLLPSSYKPVVPPEKAFPSATIATGR-SSTPRVDIVEGTSSERDKPVKPVD 365
Query: 434 SSNEPWKFQSQNATNSQEMDVDGGIIISEELEKKRN---TQL-WPPPV---SCFASPGSS 276
S +D+ I E+ + K N TQL WPPP A G
Sbjct: 366 S-----------------LDISPQIRGKEDSDSKDNINTTQLSWPPPFWKPQAPAEGGVK 408
Query: 275 QANARSMQKAEAVAV 231
A +S E + +
Sbjct: 409 SATDKSQNATEEMEI 423
>ref|XP_003611972.1| Transcription initiation factor IIB [Medicago truncatula]
gi|358344389|ref|XP_003636272.1| Transcription
initiation factor IIB [Medicago truncatula]
gi|355502207|gb|AES83410.1| Transcription initiation
factor IIB [Medicago truncatula]
gi|355513307|gb|AES94930.1| Transcription initiation
factor IIB [Medicago truncatula]
gi|388496684|gb|AFK36408.1| unknown [Medicago
truncatula]
Length = 487
Score = 173 bits (439), Expect = 3e-41
Identities = 106/237 (44%), Positives = 130/237 (54%), Gaps = 54/237 (22%)
Frame = -2
Query: 785 QELATHIGEVVINKCFCTRRNPXXXXXXXXXXXSQLEDKRKTQAEICKVTGLTEVTLRKV 606
QELATHIG+VVINKCFCTRRNP QLEDKRKTQAEICKVTGLTEVTLRKV
Sbjct: 248 QELATHIGDVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKV 307
Query: 605 YKELLENWDDLLPSNYTPAIPPEKAFPTATIASGRSSSTP----RINDGIEAEIKPVESR 438
YKELLENWDDLLPSNYTPA+PPE+AFPT IASGRSS+T + +++E P
Sbjct: 308 YKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSSTTKVDAIEVTSSLDSENLPEFKP 367
Query: 437 DSSNEP-------------------WKFQSQNATNS-------QEMDVDG---------- 366
+ +NE W+ Q +AT + + MD+DG
Sbjct: 368 NKANEAEGKSNARASQSTAIQQSTFWQSQLPSATQNHQNPNVLESMDIDGLQRNHQQPEP 427
Query: 365 ------GIIISEELEKKRNTQLWPPPVSCFAS--------PGSSQANARSMQKAEAV 237
G I + + QL+ PP S +S P S+ N R +Q ++ +
Sbjct: 428 MVEVANGAAIGSSV---NSNQLYSPPASSSSSVMRSLSAPPSSAPPNIRHLQSSKTM 481
>ref|XP_002867001.1| transcription factor IIB family protein [Arabidopsis lyrata subsp.
lyrata] gi|297312837|gb|EFH43260.1| transcription factor
IIB family protein [Arabidopsis lyrata subsp. lyrata]
Length = 506
Score = 173 bits (438), Expect = 4e-41
Identities = 93/158 (58%), Positives = 105/158 (66%), Gaps = 22/158 (13%)
Frame = -2
Query: 785 QELATHIGEVVINKCFCTRRNPXXXXXXXXXXXSQLEDKRKTQAEICKVTGLTEVTLRKV 606
QELATHIGEVVINKCFCTRRNP QLEDKRKTQAEICK+TGLTEVTLRKV
Sbjct: 247 QELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITGLTEVTLRKV 306
Query: 605 YKELLENWDDLLPSNYTPAIPPEKAFPTATIASGRSSSTPRINDGIE--------AEIKP 450
YKELLENWDDLLPSNYTPA+PPEKAFPT TI++ R S+TPR D E +KP
Sbjct: 307 YKELLENWDDLLPSNYTPAVPPEKAFPTTTISTTR-STTPRAADPPEPSFVDRDKPSVKP 365
Query: 449 VESRDSS--------------NEPWKFQSQNATNSQEM 378
+E+ D + +PW F + + N EM
Sbjct: 366 IETSDHTYQQPKGKEDKQPKFRQPWLFGTASVMNPGEM 403
>ref|XP_002521582.1| RNA polymerase II transcription factor, putative [Ricinus communis]
gi|223539260|gb|EEF40853.1| RNA polymerase II
transcription factor, putative [Ricinus communis]
Length = 511
Score = 173 bits (438), Expect = 4e-41
Identities = 106/203 (52%), Positives = 124/203 (61%), Gaps = 1/203 (0%)
Frame = -2
Query: 785 QELATHIGEVVINKCFCTRRNPXXXXXXXXXXXSQLEDKRKTQAEICKVTGLTEVTLRKV 606
QELATHIGEVVINKCFCTRRNP QLEDKRKTQAEICKVTGLTEVTLRKV
Sbjct: 247 QELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKV 306
Query: 605 YKELLENWDDLLPSNYTPAIPPEKAFPTATIASGRSSSTPRINDGIEAEIKPVESRDSSN 426
YKELLENWDDLLPSNYTPA+PPEKAFPT I SGRSS+ PR+ D +E PV D
Sbjct: 307 YKELLENWDDLLPSNYTPAVPPEKAFPTTVITSGRSSA-PRV-DPVEVTSPPV---DKDK 361
Query: 425 EPWKFQSQNATNSQEMDVDGGIIISEELEKKRNTQLWPPPVSCFASPGSSQANARS-MQK 249
+P N TN+ E++E N++ S G + N R +
Sbjct: 362 QP--DNKSNKTNNVLARA------KEDIESNGNSR---------GSRGPAWQNFRQPWLQ 404
Query: 248 AEAVAVSSIGDLNRHGNDNRS*C 180
A V++ G+ N +GN+ + C
Sbjct: 405 FGASGVTTSGEKNLNGNELQGSC 427