BLASTX nr result

ID: Atractylodes21_contig00035993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035993
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330567.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_004139849.1| PREDICTED: F-box protein At-B-like [Cucumis ...    89   4e-16
ref|XP_002265565.2| PREDICTED: F-box protein At-B-like [Vitis vi...    84   9e-15
emb|CBI39868.3| unnamed protein product [Vitis vinifera]               84   9e-15
emb|CAN77480.1| hypothetical protein VITISV_021632 [Vitis vinifera]    83   2e-14

>ref|XP_002330567.1| predicted protein [Populus trichocarpa] gi|222872125|gb|EEF09256.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 38/70 (54%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
 Frame = -1

Query: 428 DLYNCTALSVESFKFLKKPLFCGLQWIGIGRTRLISGD-FGLAEVRKERQWLTICTGGCE 252
           D++NC  LS ++ K L+KPLF GL WIGIG+T L S +   + E++KER WLT+C  GCE
Sbjct: 517 DIFNCVGLSADALKLLRKPLFRGLHWIGIGKTHLSSNEGTMITEIQKERPWLTLCLDGCE 576

Query: 251 VGCHDAWQLH 222
           + CHD WQ H
Sbjct: 577 MQCHDGWQFH 586


>ref|XP_004139849.1| PREDICTED: F-box protein At-B-like [Cucumis sativus]
           gi|449482753|ref|XP_004156393.1| PREDICTED: F-box
           protein At-B-like [Cucumis sativus]
          Length = 173

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
 Frame = -1

Query: 428 DLYNCTALSVESFKFLKKPLFCGLQWIGIGRTRLIS-GDFGLAEVRKERQWLTICTGGCE 252
           DL+NC  LS+ +++  + P F GLQW+GIG TRL S G+  + E+  +R WLT+C  GCE
Sbjct: 102 DLFNCIGLSIGAWRSFRGPQFGGLQWLGIGNTRLCSNGNVDMVELCLKRPWLTLCLEGCE 161

Query: 251 VGCHDAWQLHKS 216
           VGCHD WQ H+S
Sbjct: 162 VGCHDGWQFHRS 173


>ref|XP_002265565.2| PREDICTED: F-box protein At-B-like [Vitis vinifera]
          Length = 619

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 38/70 (54%), Positives = 49/70 (70%)
 Frame = -1

Query: 428 DLYNCTALSVESFKFLKKPLFCGLQWIGIGRTRLISGDFGLAEVRKERQWLTICTGGCEV 249
           DL++CT LSV+S + LK+P F  L+WIG+GRT L SG     E+  ER WLT+C  GCE+
Sbjct: 547 DLFHCTGLSVKSLESLKRPFFQALKWIGLGRTCL-SGKAN--EILNERPWLTLCLDGCEM 603

Query: 248 GCHDAWQLHK 219
           GCHD W  H+
Sbjct: 604 GCHDGWHFHR 613


>emb|CBI39868.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 38/70 (54%), Positives = 49/70 (70%)
 Frame = -1

Query: 428 DLYNCTALSVESFKFLKKPLFCGLQWIGIGRTRLISGDFGLAEVRKERQWLTICTGGCEV 249
           DL++CT LSV+S + LK+P F  L+WIG+GRT L SG     E+  ER WLT+C  GCE+
Sbjct: 535 DLFHCTGLSVKSLESLKRPFFQALKWIGLGRTCL-SGKAN--EILNERPWLTLCLDGCEM 591

Query: 248 GCHDAWQLHK 219
           GCHD W  H+
Sbjct: 592 GCHDGWHFHR 601


>emb|CAN77480.1| hypothetical protein VITISV_021632 [Vitis vinifera]
          Length = 2706

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/70 (52%), Positives = 49/70 (70%)
 Frame = -1

Query: 428  DLYNCTALSVESFKFLKKPLFCGLQWIGIGRTRLISGDFGLAEVRKERQWLTICTGGCEV 249
            DL++CT LS++S + LK+P F  L+WIG+GRT L SG     E+  ER WLT+C  GCE+
Sbjct: 2634 DLFHCTGLSIKSLESLKRPFFQALKWIGLGRTCL-SGKGN--EICNERPWLTLCLDGCEM 2690

Query: 248  GCHDAWQLHK 219
            GCHD W  H+
Sbjct: 2691 GCHDGWHFHR 2700


Top