BLASTX nr result

ID: Atractylodes21_contig00035857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035857
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34194.3| unnamed protein product [Vitis vinifera]              189   3e-46
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   189   3e-46
ref|XP_003520835.1| PREDICTED: multisubstrate pseudouridine synt...   175   3e-42
ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric...   168   5e-40
ref|XP_004171457.1| PREDICTED: multisubstrate pseudouridine synt...   163   1e-38

>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  189 bits (479), Expect = 3e-46
 Identities = 95/134 (70%), Positives = 106/134 (79%)
 Frame = -1

Query: 402 VGISCYISPLPGFRGILKQRYCDFVVNEVDLDGNVVHLTSLDAPAEIAEEHETNTTDQLN 223
           VGIS YIS LPGFRGILKQRYCDF+VNEVD DGNVVHLTSLDAP E  E++ET  +DQ N
Sbjct: 9   VGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESMEKNETKISDQSN 68

Query: 222 GDQGTEIESFRALVGDSDANSLKEFIDKINSDAEDRATSIVLSPSSDKVHRTAVHNFFKE 43
               +EIE FR+LVGDSD   LK  ID++ S  ED  + IVLS SSDK HRTAVHNFFKE
Sbjct: 69  KGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSHRTAVHNFFKE 128

Query: 42  RLKFLVTDTVDGPE 1
            LKFLVTDT+DGP+
Sbjct: 129 NLKFLVTDTIDGPD 142


>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
           vinifera]
          Length = 694

 Score =  189 bits (479), Expect = 3e-46
 Identities = 95/134 (70%), Positives = 106/134 (79%)
 Frame = -1

Query: 402 VGISCYISPLPGFRGILKQRYCDFVVNEVDLDGNVVHLTSLDAPAEIAEEHETNTTDQLN 223
           VGIS YIS LPGFRGILKQRYCDF+VNEVD DGNVVHLTSLDAP E  E++ET  +DQ N
Sbjct: 9   VGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESMEKNETKISDQSN 68

Query: 222 GDQGTEIESFRALVGDSDANSLKEFIDKINSDAEDRATSIVLSPSSDKVHRTAVHNFFKE 43
               +EIE FR+LVGDSD   LK  ID++ S  ED  + IVLS SSDK HRTAVHNFFKE
Sbjct: 69  KGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSHRTAVHNFFKE 128

Query: 42  RLKFLVTDTVDGPE 1
            LKFLVTDT+DGP+
Sbjct: 129 NLKFLVTDTIDGPD 142


>ref|XP_003520835.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine
           max]
          Length = 687

 Score =  175 bits (444), Expect = 3e-42
 Identities = 89/134 (66%), Positives = 105/134 (78%)
 Frame = -1

Query: 402 VGISCYISPLPGFRGILKQRYCDFVVNEVDLDGNVVHLTSLDAPAEIAEEHETNTTDQLN 223
           VGISC+IS LPGFRGILKQRY DF+VNEVD DG VV L+SLDAP E  EE+ TNT+D + 
Sbjct: 11  VGISCFISDLPGFRGILKQRYSDFIVNEVDRDGTVVQLSSLDAPQEEPEENGTNTSDNVV 70

Query: 222 GDQGTEIESFRALVGDSDANSLKEFIDKINSDAEDRATSIVLSPSSDKVHRTAVHNFFKE 43
               ++IESF++L GDSDA  L+EFI+KIN+  ED  + IVLSP SDK HR A+HNFFKE
Sbjct: 71  S-YASQIESFKSLAGDSDAVLLEEFINKINAGGEDGVSPIVLSPDSDKSHRKAMHNFFKE 129

Query: 42  RLKFLVTDTVDGPE 1
             KFLVTD VDGP+
Sbjct: 130 NFKFLVTDVVDGPD 143


>ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis]
           gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase
           d, putative [Ricinus communis]
          Length = 753

 Score =  168 bits (425), Expect = 5e-40
 Identities = 87/138 (63%), Positives = 103/138 (74%), Gaps = 4/138 (2%)
 Frame = -1

Query: 402 VGISCYISPLPGFRGILKQRYCDFVVNEVDLDGNVVHLTSLDAP---AEIAEEHETNTTD 232
           VGISCYIS +PGFRGILKQRY DF+VNEVD +GNVVHLTSL  P    E+AEE E   T+
Sbjct: 57  VGISCYISKVPGFRGILKQRYSDFIVNEVDNNGNVVHLTSLHVPREIVEVAEEREEEITN 116

Query: 231 QLNGDQGTEIESFRALVGDSDANSLKEFIDK-INSDAEDRATSIVLSPSSDKVHRTAVHN 55
           Q+  +   EIESFR L GD+D   L+ FI++ I+ D     + I+LSP SDK HRTA HN
Sbjct: 117 QVGKNYAAEIESFRELAGDADTQRLEAFINQVISEDNCINISPILLSPDSDKAHRTATHN 176

Query: 54  FFKERLKFLVTDTVDGPE 1
           FFKE+LKFLVTDTVDGP+
Sbjct: 177 FFKEKLKFLVTDTVDGPD 194


>ref|XP_004171457.1| PREDICTED: multisubstrate pseudouridine synthase 7-like, partial
           [Cucumis sativus]
          Length = 402

 Score =  163 bits (413), Expect = 1e-38
 Identities = 84/134 (62%), Positives = 95/134 (70%)
 Frame = -1

Query: 402 VGISCYISPLPGFRGILKQRYCDFVVNEVDLDGNVVHLTSLDAPAEIAEEHETNTTDQLN 223
           VGI  YIS LPGFRGILKQRY DF+VNEVD DGNVVHLTSLDAP EI  E         +
Sbjct: 11  VGILSYISSLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLDAPPEIVSESGPTIVHSTS 70

Query: 222 GDQGTEIESFRALVGDSDANSLKEFIDKINSDAEDRATSIVLSPSSDKVHRTAVHNFFKE 43
               +EIE FR+L GDSDA  L+ F+ +INS   D    IV SP +DK HRTAVHNFFK 
Sbjct: 71  QSYASEIELFRSLAGDSDAEILEIFLKQINSGVNDDILPIVFSPDTDKTHRTAVHNFFK- 129

Query: 42  RLKFLVTDTVDGPE 1
           + KFLVTDT+DGP+
Sbjct: 130 KFKFLVTDTIDGPD 143


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