BLASTX nr result

ID: Atractylodes21_contig00035842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035842
         (925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-...    57   5e-06
emb|CBI39750.3| unnamed protein product [Vitis vinifera]               57   5e-06
emb|CAN67146.1| hypothetical protein VITISV_042361 [Vitis vinifera]    57   5e-06

>ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera]
          Length = 4116

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 48/130 (36%), Positives = 62/130 (47%), Gaps = 39/130 (30%)
 Frame = +1

Query: 325 VEPTSGRQSESISVSGIIKRYFS---------------VNDEVTSTNSKPGV-------- 435
           VE  S R SE +SVSGII+RYFS               VN  V S+ S   +        
Sbjct: 226 VECPSERSSEVVSVSGIIERYFSNFDGMNHFGSPSSSEVNSRVISSWSNEQLRVTTDGNH 285

Query: 436 --------PKYAPKTP------PAMTNVR--ASRDLKKSSGVGKRLIVAANNLGISSSDK 567
                   P    KTP         TN R   SRD  + + VGKRL++A+N LGISSS +
Sbjct: 286 SDIQIGTTPLLTTKTPARETPFSLSTNSRPGTSRDKLEITEVGKRLVMASNTLGISSSKQ 345

Query: 568 KPVISLCKYK 597
           +P IS+ ++K
Sbjct: 346 RPAISISRFK 355


>emb|CBI39750.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 48/130 (36%), Positives = 62/130 (47%), Gaps = 39/130 (30%)
 Frame = +1

Query: 325 VEPTSGRQSESISVSGIIKRYFS---------------VNDEVTSTNSKPGV-------- 435
           VE  S R SE +SVSGII+RYFS               VN  V S+ S   +        
Sbjct: 226 VECPSERSSEVVSVSGIIERYFSNFDGMNHFGSPSSSEVNSRVISSWSNEQLRVTTDGNH 285

Query: 436 --------PKYAPKTP------PAMTNVR--ASRDLKKSSGVGKRLIVAANNLGISSSDK 567
                   P    KTP         TN R   SRD  + + VGKRL++A+N LGISSS +
Sbjct: 286 SDIQIGTTPLLTTKTPARETPFSLSTNSRPGTSRDKLEITEVGKRLVMASNTLGISSSKQ 345

Query: 568 KPVISLCKYK 597
           +P IS+ ++K
Sbjct: 346 RPAISISRFK 355


>emb|CAN67146.1| hypothetical protein VITISV_042361 [Vitis vinifera]
          Length = 413

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 48/130 (36%), Positives = 62/130 (47%), Gaps = 39/130 (30%)
 Frame = +1

Query: 325 VEPTSGRQSESISVSGIIKRYFS---------------VNDEVTSTNSKPGV-------- 435
           VE  S R SE +SVSGII+RYFS               VN  V S+ S   +        
Sbjct: 260 VECPSERSSEVVSVSGIIERYFSNFDGMNHFGSPSSSEVNSRVISSWSNEQLRVTTDGNH 319

Query: 436 --------PKYAPKTP------PAMTNVR--ASRDLKKSSGVGKRLIVAANNLGISSSDK 567
                   P    KTP         TN R   SRD  + + VGKRL++A+N LGISSS +
Sbjct: 320 SDIQIGTTPLLTTKTPARETPFSLSTNSRPGTSRDKLEITEVGKRLVMASNTLGISSSKQ 379

Query: 568 KPVISLCKYK 597
           +P IS+ ++K
Sbjct: 380 RPAISISRFK 389


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