BLASTX nr result

ID: Atractylodes21_contig00035827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035827
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515961.1| conserved hypothetical protein [Ricinus comm...   153   2e-35
ref|XP_002883301.1| predicted protein [Arabidopsis lyrata subsp....   146   1e-33
ref|NP_188773.1| clavaminate synthase-like protein [Arabidopsis ...   145   3e-33
ref|NP_001240991.1| uncharacterized protein LOC100797326 [Glycin...   143   1e-32
ref|XP_002298245.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31

>ref|XP_002515961.1| conserved hypothetical protein [Ricinus communis]
           gi|223544866|gb|EEF46381.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 322

 Score =  153 bits (386), Expect = 2e-35
 Identities = 81/127 (63%), Positives = 99/127 (77%), Gaps = 4/127 (3%)
 Frame = -1

Query: 411 FREVRVSQQKDCRGQLFPKVVSPDPTLPCKLSVLTDSIKAYKSWLELQLHQTGAILFRGF 232
           F+E+ +S QK     LFP ++SP+P+    LS LTDSIK+ K +L   LH++GAILFRGF
Sbjct: 5   FKEIEISHQKHFNSLLFPSILSPNPST---LSSLTDSIKSGKPYLTSLLHKSGAILFRGF 61

Query: 231 PVSSASDFNELVKAFGFDELIYSGGAAPRTHVVGRVFTSNESPPDHKIPFHHEMAIV--I 58
            V++ASDFN++V+AFGFDEL Y GGAAPRT+VVGRVFT+NESPPD KIPFHHEMA V   
Sbjct: 62  SVNTASDFNDVVEAFGFDELPYIGGAAPRTNVVGRVFTANESPPDQKIPFHHEMAQVPEF 121

Query: 57  PS--LFF 43
           PS  LFF
Sbjct: 122 PSKLLFF 128


>ref|XP_002883301.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329141|gb|EFH59560.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 330

 Score =  146 bits (369), Expect = 1e-33
 Identities = 76/136 (55%), Positives = 93/136 (68%), Gaps = 6/136 (4%)
 Frame = -1

Query: 426 MADEFFREVRVSQQKDCRGQLFPKVVSPD----PTLPCKLSVLTDSIKAYKSWLELQLHQ 259
           MA+    E R+ QQK  + + FP V+SP     P     L + T SIK  K +L+  LH+
Sbjct: 1   MAELLVEETRIPQQKHYKSKPFPAVISPPSSSIPIPAVSLPLFTQSIKNQKPYLDSLLHE 60

Query: 258 TGAILFRGFPVSSASDFNELVKAFGFDELIYSGGAAPRTHVVGRVFTSNESPPDHKIPFH 79
           +G ++FRGFPV+SA DFN++V+AFGFDE  Y GGAAPRT VVGRVFT+NESPPD KIPFH
Sbjct: 61  SGTVIFRGFPVNSAEDFNDVVEAFGFDEFPYVGGAAPRTSVVGRVFTANESPPDQKIPFH 120

Query: 78  HEMAIV--IPSLFFTY 37
           HEMA V   PS  F Y
Sbjct: 121 HEMAQVPEFPSKLFFY 136


>ref|NP_188773.1| clavaminate synthase-like protein [Arabidopsis thaliana]
           gi|73921104|sp|Q9LIG0.1|Y3136_ARATH RecName:
           Full=Clavaminate synthase-like protein At3g21360
           gi|56967335|pdb|1Y0Z|A Chain A, X-Ray Structure Of Gene
           Product From Arabidopsis Thaliana At3g21360
           gi|56967336|pdb|1Y0Z|B Chain B, X-Ray Structure Of Gene
           Product From Arabidopsis Thaliana At3g21360
           gi|150261485|pdb|2Q4A|A Chain A, Ensemble Refinement Of
           The Protein Crystal Structure Of Gene Product From
           Arabidopsis Thaliana At3g21360 gi|150261486|pdb|2Q4A|B
           Chain B, Ensemble Refinement Of The Protein Crystal
           Structure Of Gene Product From Arabidopsis Thaliana
           At3g21360 gi|9294683|dbj|BAB03049.1| syringomycin
           biosynthesis enzyme-like protein [Arabidopsis thaliana]
           gi|26450615|dbj|BAC42419.1| unknown protein [Arabidopsis
           thaliana] gi|182623791|gb|ACB88834.1| At3g21360
           [Arabidopsis thaliana] gi|332642979|gb|AEE76500.1|
           clavaminate synthase-like protein [Arabidopsis thaliana]
          Length = 330

 Score =  145 bits (367), Expect = 3e-33
 Identities = 77/136 (56%), Positives = 93/136 (68%), Gaps = 6/136 (4%)
 Frame = -1

Query: 426 MADEFFREVRVSQQKDCRGQLFPKVVSPD----PTLPCKLSVLTDSIKAYKSWLELQLHQ 259
           MA+    E  + QQK    + FP V+SP     P     L + T +IK  K +L+  LH+
Sbjct: 1   MAELLLVETPIPQQKHYESKPFPAVISPPSASIPIPALSLPLFTQTIKTQKHYLDSLLHE 60

Query: 258 TGAILFRGFPVSSASDFNELVKAFGFDELIYSGGAAPRTHVVGRVFTSNESPPDHKIPFH 79
           +GA+LFRGFPV+SA DFN++V+AFGFDEL Y GGAAPRT VVGRVFT+NESPPD KIPFH
Sbjct: 61  SGAVLFRGFPVNSADDFNDVVEAFGFDELPYVGGAAPRTSVVGRVFTANESPPDQKIPFH 120

Query: 78  HEMAIV--IPSLFFTY 37
           HEMA V   PS  F Y
Sbjct: 121 HEMAQVREFPSKLFFY 136


>ref|NP_001240991.1| uncharacterized protein LOC100797326 [Glycine max]
           gi|255635574|gb|ACU18137.1| unknown [Glycine max]
          Length = 323

 Score =  143 bits (361), Expect = 1e-32
 Identities = 78/125 (62%), Positives = 94/125 (75%), Gaps = 4/125 (3%)
 Frame = -1

Query: 405 EVRVSQQKDCRGQLFPKVVSPDPTLPCKLSVLTDSIKAYKSWLELQLHQTGAILFRGFPV 226
           E++V  QK   G  FP VVSP P     +  LTDS+K  K++LE  L Q+GA+LFRGFP+
Sbjct: 7   EIQVPGQKFVNGVPFPAVVSPPPATASAVP-LTDSVKTQKAFLESLLLQSGAVLFRGFPL 65

Query: 225 SSASDFNELVKAFGFDELIYSGGAAPRTHVVGRVFTSNESPPDHKIPFHHEMAIV--IPS 52
           S+AS FN++V+AFG+DEL Y GGAAPRT+VVGRVFT+NESPPD KIPFHHEMA V   PS
Sbjct: 66  STASHFNDVVEAFGYDELPYVGGAAPRTNVVGRVFTANESPPDQKIPFHHEMAQVPQFPS 125

Query: 51  --LFF 43
             LFF
Sbjct: 126 KLLFF 130


>ref|XP_002298245.1| predicted protein [Populus trichocarpa] gi|222845503|gb|EEE83050.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score =  140 bits (353), Expect = 1e-31
 Identities = 75/130 (57%), Positives = 94/130 (72%), Gaps = 5/130 (3%)
 Frame = -1

Query: 411 FREVRVSQQK---DCRGQLFPKVVSPDPTLPCKLSVLTDSIKAYKSWLELQLHQTGAILF 241
           F+E+++  QK   +     FP V+SP+P     LS  TDSI A K +L+  L +TGAILF
Sbjct: 5   FKEIQIQHQKHYSNIPSFPFPSVLSPNPFSSSTLSFFTDSIIAQKPFLDSLLLKTGAILF 64

Query: 240 RGFPVSSASDFNELVKAFGFDELIYSGGAAPRTHVVGRVFTSNESPPDHKIPFHHEMAIV 61
           RGF V++A DFN++V+AFGF+EL Y GGAAPRT+VVGRVFT+NESPPD KIPFHHEMA V
Sbjct: 65  RGFDVNTAKDFNDVVEAFGFEELPYVGGAAPRTNVVGRVFTANESPPDQKIPFHHEMAQV 124

Query: 60  --IPSLFFTY 37
              PS  F +
Sbjct: 125 PEFPSKLFFF 134


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