BLASTX nr result

ID: Atractylodes21_contig00035747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035747
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial pro...   112   3e-23
ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial pro...   105   3e-21
ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
ref|XP_002519696.1| RNA binding protein, putative [Ricinus commu...   101   5e-20
ref|NP_174294.1| Intron maturase, type II-like protein [Arabidop...   100   2e-19

>ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Glycine max]
          Length = 686

 Score =  112 bits (280), Expect = 3e-23
 Identities = 52/71 (73%), Positives = 62/71 (87%)
 Frame = -2

Query: 243 FSPKSHAFRPQRNAHTVIRTIRSNFAGYVWFLKGDLTLLFNNVDINLIMGFVEKGVKDQK 64
           FSPKSHAFRP RNAHTVIRTIRSNFAGY+WFLKGDLT + + VD N++M  +EKG +D+K
Sbjct: 178 FSPKSHAFRPGRNAHTVIRTIRSNFAGYLWFLKGDLTEILDRVDPNVVMRSLEKGTRDKK 237

Query: 63  VLGLIKSGLKG 31
           +LGLIKS L+G
Sbjct: 238 ILGLIKSALEG 248


>ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 689

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/69 (71%), Positives = 60/69 (86%)
 Frame = -2

Query: 243 FSPKSHAFRPQRNAHTVIRTIRSNFAGYVWFLKGDLTLLFNNVDINLIMGFVEKGVKDQK 64
           FS KSHAFRP RNAHTVIRTIRSNFAGY+WFL+GD++ +F  VD +++MG++EK VKD+K
Sbjct: 181 FSSKSHAFRPGRNAHTVIRTIRSNFAGYLWFLRGDVSEIFETVDTDVVMGYLEKYVKDKK 240

Query: 63  VLGLIKSGL 37
           VLGLIK  L
Sbjct: 241 VLGLIKLAL 249


>ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|222848302|gb|EEE85849.1|
           predicted protein [Populus trichocarpa]
          Length = 623

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/70 (68%), Positives = 60/70 (85%)
 Frame = -2

Query: 243 FSPKSHAFRPQRNAHTVIRTIRSNFAGYVWFLKGDLTLLFNNVDINLIMGFVEKGVKDQK 64
           FS KSHAFRP RNAHTVIRTIRSNFAGY+WFL+GDL+ + +++D +++MG VEK V+D+K
Sbjct: 143 FSRKSHAFRPGRNAHTVIRTIRSNFAGYLWFLRGDLSEILDDIDADVVMGCVEKVVRDKK 202

Query: 63  VLGLIKSGLK 34
           VL LIK  LK
Sbjct: 203 VLNLIKKALK 212


>ref|XP_002519696.1| RNA binding protein, putative [Ricinus communis]
           gi|223541113|gb|EEF42669.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 681

 Score =  101 bits (252), Expect = 5e-20
 Identities = 49/70 (70%), Positives = 57/70 (81%)
 Frame = -2

Query: 243 FSPKSHAFRPQRNAHTVIRTIRSNFAGYVWFLKGDLTLLFNNVDINLIMGFVEKGVKDQK 64
           FS KSHAFRP RNAHTVIRTIRSNFAGY+WFL+GDL+ +F  VD N ++  VEK VKD+K
Sbjct: 173 FSGKSHAFRPGRNAHTVIRTIRSNFAGYLWFLRGDLSEIFYAVDANFVLECVEKVVKDKK 232

Query: 63  VLGLIKSGLK 34
           VL L+K  LK
Sbjct: 233 VLNLVKDALK 242


>ref|NP_174294.1| Intron maturase, type II-like protein [Arabidopsis thaliana]
           gi|12324175|gb|AAG52062.1|AC022455_16 unknown protein;
           35070-37205 [Arabidopsis thaliana]
           gi|332193046|gb|AEE31167.1| Intron maturase, type
           II-like protein [Arabidopsis thaliana]
          Length = 711

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/70 (64%), Positives = 60/70 (85%)
 Frame = -2

Query: 243 FSPKSHAFRPQRNAHTVIRTIRSNFAGYVWFLKGDLTLLFNNVDINLIMGFVEKGVKDQK 64
           FS KSH FRP RN HTVIRTIRSNFAGY+WF+KGD++ + ++VD++++M  ++K VKD+K
Sbjct: 195 FSSKSHGFRPGRNPHTVIRTIRSNFAGYLWFMKGDVSEMLDHVDVDVVMNCLQKVVKDRK 254

Query: 63  VLGLIKSGLK 34
           VLGLI+S LK
Sbjct: 255 VLGLIESSLK 264


Top