BLASTX nr result

ID: Atractylodes21_contig00035736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035736
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283684.1| PREDICTED: uncharacterized protein LOC100267...    69   3e-10
ref|XP_002298927.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002331323.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002283684.1| PREDICTED: uncharacterized protein LOC100267631 [Vitis vinifera]
           gi|147855785|emb|CAN78611.1| hypothetical protein
           VITISV_026296 [Vitis vinifera]
           gi|302142808|emb|CBI20103.3| unnamed protein product
           [Vitis vinifera]
          Length = 171

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 48/109 (44%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
 Frame = +2

Query: 2   STHQAVLFFACTAFLVVVVIGLCAATAFRKRATKNV----RDHGGVVEPMEAKGSTGH-- 163
           ST +AVL F CTAF V   IG+C A A +KRA +       D  GV   +  K   G   
Sbjct: 14  STQEAVLLFVCTAFSV---IGVCTAVALKKRARRRQVVGGEDVDGVESMISKKWGDGGCG 70

Query: 164 WLRVKVSLTGSVRWSKASKWDGNLSASSKEQPTPLLA--RGGGEVGWPS 304
           W  +K  L G+VRWS ASKWD        E+P PLLA  +  G+VGW S
Sbjct: 71  WGSIKRVLMGTVRWSGASKWD--------ERPLPLLAVQQYEGDVGWQS 111


>ref|XP_002298927.1| predicted protein [Populus trichocarpa] gi|222846185|gb|EEE83732.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
 Frame = +2

Query: 2   STHQAVLFFACTAFLVVVVIGLCAATAFRKRATKNVR-------DHGGVVEPMEAKGSTG 160
           +T +AVL F C+AF    VI LC AT  +++A +  R         G  +   E    + 
Sbjct: 14  TTQEAVLLFVCSAF---AVIALCTATMLKRKAQRKPRLVNQDPISAGTSIRWSEPDPGSN 70

Query: 161 HWLRVKVSLTGSVRWSKASKWDGNLSASSKEQPTPLLA--RGGGEVGWPS 304
            W+ +K  L  S+RWS+ASKW+         +P PLL   R    +GW S
Sbjct: 71  DWITIKTVLMESMRWSEASKWE----EGEMLRPPPLLGLERCDSSIGWQS 116


>ref|XP_002331323.1| predicted protein [Populus trichocarpa] gi|222873906|gb|EEF11037.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
 Frame = +2

Query: 2   STHQAVLFFACTAFLVVVVIGLCAATAFRKRATKNVRD------HGGVVEPMEAKGSTGH 163
           +T +AVL F CTA   + VI LCAA   +++A    R        G      E +  + +
Sbjct: 14  TTQEAVLLFVCTA---LAVIALCAAIMLKRKAQTKQRSVNQDPSTGSSKRWSEPEPGSNN 70

Query: 164 WLRVKVSLTGSVRWSKASKWD----GNLSASSKEQPTPLLA--RGGGEVGWPS 304
           W+ ++  L  S+RWS ASKWD    G+ S S    P P+L   R    +GW S
Sbjct: 71  WITIRRVLMESMRWSGASKWDEGSSGSGSGSGMLLPPPVLGLERCESSMGWQS 123


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