BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035714
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529243.1| PREDICTED: pentatricopeptide repeat-containi...   102   4e-20
ref|XP_002521865.1| pentatricopeptide repeat-containing protein,...    99   3e-19
gb|AFK45134.1| unknown [Lotus japonicus]                               98   1e-18
ref|XP_003555735.1| PREDICTED: pentatricopeptide repeat-containi...    98   1e-18
ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containi...    89   6e-16

>ref|XP_003529243.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Glycine max]
          Length = 601

 Score =  102 bits (254), Expect = 4e-20
 Identities = 47/105 (44%), Positives = 75/105 (71%), Gaps = 3/105 (2%)
 Frame = +2

Query: 248 EDESSDSPLL---ELGMEVQDFQDSSVPELENLNVLICNLFKDSKTEEMGFECYQKAKRR 418
           E+ SS++P++   ++  +VQ  Q  S PE ENLN  +C LF+D KT+E+ F+ YQ+ K R
Sbjct: 52  EEPSSNTPIIHVVDVNFDVQ--QQYSKPEPENLNEFLCGLFEDPKTKELAFDYYQRLKER 109

Query: 419 PDFVPRRSTLHHLIRYSMRLKNWNSVWSISEDFRKFNVYPDASSC 553
           P+F P + TL H+IRY + LK+W+S+ S+S+DF+ ++V PD ++C
Sbjct: 110 PEFRPEKPTLKHVIRYLVSLKSWDSILSVSDDFKVYHVLPDRATC 154


>ref|XP_002521865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538903|gb|EEF40501.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 449

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 3/165 (1%)
 Frame = +2

Query: 68  MAISISSDFSLACMK---KSHKKLIFNPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 238
           MAIS S D+S+A +K   K HK ++F PS                               
Sbjct: 1   MAISRSPDWSVASIKSCRKPHKIIVFTPS----WKTLPFLSLPCFSNLSLFQLNASSCPS 56

Query: 239 XXXEDESSDSPLLELGMEVQDFQDSSVPELENLNVLICNLFKDSKTEEMGFECYQKAKRR 418
              E+ S++ P+++L   VQ+ Q+  +P+ ++LN  +C + +D +TE + +E Y+KA  R
Sbjct: 57  PILEEPSTNFPVIQLDFRVQNSQEYQIPDSKSLNKFLCGILRDPRTEHLAYEYYKKATER 116

Query: 419 PDFVPRRSTLHHLIRYSMRLKNWNSVWSISEDFRKFNVYPDASSC 553
            +F P +  L  LIRY M+ KNW+ +  +++DF K+NV PD+++C
Sbjct: 117 QEFRPDKPMLKLLIRYLMQSKNWDLILPVADDFNKYNVLPDSNTC 161


>gb|AFK45134.1| unknown [Lotus japonicus]
          Length = 208

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 47/105 (44%), Positives = 68/105 (64%), Gaps = 3/105 (2%)
 Frame = +2

Query: 248 EDESSDSPLLELGME---VQDFQDSSVPELENLNVLICNLFKDSKTEEMGFECYQKAKRR 418
           E  +S++P+L++          Q  S P  ENLN  +C LF+D KTEE+ F+ YQ+ K R
Sbjct: 58  EASNSNTPMLDVDNVNNIAGSHQQYSNPGTENLNEFLCGLFQDPKTEELAFDYYQRLKDR 117

Query: 419 PDFVPRRSTLHHLIRYSMRLKNWNSVWSISEDFRKFNVYPDASSC 553
           P F P +STL H+IRY MR K W+ + S+SEDF+ ++V PD ++C
Sbjct: 118 PVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATC 162


>ref|XP_003555735.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Glycine max]
          Length = 609

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 47/106 (44%), Positives = 70/106 (66%), Gaps = 4/106 (3%)
 Frame = +2

Query: 248 EDESSDSPLLELGMEVQDFQDS----SVPELENLNVLICNLFKDSKTEEMGFECYQKAKR 415
           E  SS++P +   ++V    D     S PE ENLN  +C LF+D KT+E+ F+ YQ+ K 
Sbjct: 57  EPSSSNTPTIIHVVDVNFAADVQKQYSKPEPENLNEFLCGLFEDPKTKELAFDYYQRLKE 116

Query: 416 RPDFVPRRSTLHHLIRYSMRLKNWNSVWSISEDFRKFNVYPDASSC 553
           RP+F P + TL H+IRY + LK+W S+ S+SEDF+ ++V PD ++C
Sbjct: 117 RPEFRPEKPTLKHVIRYLVSLKSWGSILSVSEDFKVYHVLPDRATC 162


>ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Vitis vinifera]
          Length = 609

 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 41/96 (42%), Positives = 59/96 (61%)
 Frame = +2

Query: 269 PLLELGMEVQDFQDSSVPELENLNVLICNLFKDSKTEEMGFECYQKAKRRPDFVPRRSTL 448
           P++EL +E+ D      P+ ENLN  +C LF+D ++EE+ F+ YQK K RP+F P + TL
Sbjct: 66  PVIELDVELPDL----TPKDENLNDFLCGLFRDPRSEELAFDYYQKVKERPEFRPDKETL 121

Query: 449 HHLIRYSMRLKNWNSVWSISEDFRKFNVYPDASSCC 556
             +IRY +R K W     + EDF+ F+V  D   CC
Sbjct: 122 ERIIRYLIRSKKWGLSLLVFEDFKSFDVQLDGDICC 157