BLASTX nr result

ID: Atractylodes21_contig00035711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035711
         (923 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62043.1| hypothetical protein VITISV_038847 [Vitis vinifera]   390   e-106
ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymer...   387   e-105
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...   386   e-105
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   382   e-104
ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I sub...   379   e-103

>emb|CAN62043.1| hypothetical protein VITISV_038847 [Vitis vinifera]
          Length = 416

 Score =  390 bits (1002), Expect = e-106
 Identities = 191/265 (72%), Positives = 221/265 (83%), Gaps = 5/265 (1%)
 Frame = +1

Query: 142 PDYEPLRALFSHHIHSFDHLVEYGLEKALMNIKPIEVIDSNTK-----LKLRIWFEKPEL 306
           PDYEPLR LF HHI SFDHLVE+GLE  LM++KP+E +           ++ +WF +PEL
Sbjct: 6   PDYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVESLFITHNGVFFLTRIALWFGQPEL 65

Query: 307 YPPQKERLSRTVREALYPFECRQAKISYTGKFLVDVCFKYGDGPGGAVIREKINFGQLPI 486
           YPPQKER +RT+R+ALYPFECRQAKISY+GK L DVCF+YG+G    VIREK N GQ P+
Sbjct: 66  YPPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNG---VVIREKFNLGQFPM 122

Query: 487 MLKSKLCHLRDADPQKLVTCKEEPSEMGGYFILNGLERVVRLLIVPKRNYPTSMARSAFR 666
           MLKSKLCHLR ADPQKLV+CKEE SEMGGYFILNGLERVVRLLI+PKRNYP SM R++FR
Sbjct: 123 MLKSKLCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFR 182

Query: 667 NRREGFTDKAVVIRCVREDQSAVTLNLYYLSNGSARVGFRIRGRENLLPIGLVLKALIDT 846
           +RREG+TDKAVVIRCVREDQSAVT+ LYYL NGSAR+GF I+GRE LLP+G+VLKALIDT
Sbjct: 183 DRREGYTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDT 242

Query: 847 TDHEIFMSLASVYNDKYEKAKGCVG 921
           TDHEI+ SL   Y++KYE  KG VG
Sbjct: 243 TDHEIYESLTCCYSEKYEGGKGAVG 267


>ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymerase I subunit
           RPA2-like, partial [Cucumis sativus]
          Length = 948

 Score =  387 bits (993), Expect = e-105
 Identities = 189/261 (72%), Positives = 219/261 (83%)
 Frame = +1

Query: 139 NPDYEPLRALFSHHIHSFDHLVEYGLEKALMNIKPIEVIDSNTKLKLRIWFEKPELYPPQ 318
           N DYE LR LF HHI SFDHLV+ GLE  + +IKP+E+ DS T  KLRIW  KPELYPPQ
Sbjct: 8   NEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPPQ 67

Query: 319 KERLSRTVREALYPFECRQAKISYTGKFLVDVCFKYGDGPGGAVIREKINFGQLPIMLKS 498
           KER  RT+REAL P+ECRQAKISYTGKF+ DVCF+Y +    AVIREK+NFGQ PIMLKS
Sbjct: 68  KERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEK---AVIREKLNFGQFPIMLKS 124

Query: 499 KLCHLRDADPQKLVTCKEEPSEMGGYFILNGLERVVRLLIVPKRNYPTSMARSAFRNRRE 678
           KLCHLR  DP+KLV+  EE SEMGGYF++NGLERVVRLLI PKRNYPTSM R++F +RRE
Sbjct: 125 KLCHLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRRE 184

Query: 679 GFTDKAVVIRCVREDQSAVTLNLYYLSNGSARVGFRIRGRENLLPIGLVLKALIDTTDHE 858
           G+TDKAVVIRCVREDQS+VT+ LYYL NGSAR+GF ++G+E LLPIG+VLKALIDTTDHE
Sbjct: 185 GYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHE 244

Query: 859 IFMSLASVYNDKYEKAKGCVG 921
           I+ SL S Y+DK+ K+KG VG
Sbjct: 245 IYASLTSCYSDKHGKSKGAVG 265


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
           sativus]
          Length = 1173

 Score =  386 bits (991), Expect = e-105
 Identities = 189/261 (72%), Positives = 218/261 (83%)
 Frame = +1

Query: 139 NPDYEPLRALFSHHIHSFDHLVEYGLEKALMNIKPIEVIDSNTKLKLRIWFEKPELYPPQ 318
           N DYE LR LF HHI SFDHLV+ GLE  + +IKP+E+ DS T  KLRIW  KPELYPPQ
Sbjct: 8   NEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPPQ 67

Query: 319 KERLSRTVREALYPFECRQAKISYTGKFLVDVCFKYGDGPGGAVIREKINFGQLPIMLKS 498
           KER  RT+REAL P+ECRQAKISYTGKF+ DVCF+Y +    AVIREK NFGQ PIMLKS
Sbjct: 68  KERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEK---AVIREKFNFGQFPIMLKS 124

Query: 499 KLCHLRDADPQKLVTCKEEPSEMGGYFILNGLERVVRLLIVPKRNYPTSMARSAFRNRRE 678
           KLCHLR  DP+KLV+  EE SEMGGYF++NGLERVVRLLI PKRNYPTSM R++F +RRE
Sbjct: 125 KLCHLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRRE 184

Query: 679 GFTDKAVVIRCVREDQSAVTLNLYYLSNGSARVGFRIRGRENLLPIGLVLKALIDTTDHE 858
           G+TDKAVVIRCVREDQS+VT+ LYYL NGSAR+GF ++G+E LLPIG+VLKALIDTTDHE
Sbjct: 185 GYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHE 244

Query: 859 IFMSLASVYNDKYEKAKGCVG 921
           I+ SL S Y+DK+ K+KG VG
Sbjct: 245 IYASLTSCYSDKHGKSKGAVG 265


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
           max]
          Length = 1175

 Score =  382 bits (982), Expect = e-104
 Identities = 183/260 (70%), Positives = 219/260 (84%)
 Frame = +1

Query: 142 PDYEPLRALFSHHIHSFDHLVEYGLEKALMNIKPIEVIDSNTKLKLRIWFEKPELYPPQK 321
           PD+E LR LF HHI SFD++V+ GL+  L +IKP+EV D  T  KLRIW + P LYPPQK
Sbjct: 9   PDFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQK 68

Query: 322 ERLSRTVREALYPFECRQAKISYTGKFLVDVCFKYGDGPGGAVIREKINFGQLPIMLKSK 501
           ER+SRT+REAL PFECRQAKISY+GK  +DVCF+Y DGP   +IRE +NFGQ PIML+SK
Sbjct: 69  ERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGP---IIRENVNFGQFPIMLQSK 125

Query: 502 LCHLRDADPQKLVTCKEEPSEMGGYFILNGLERVVRLLIVPKRNYPTSMARSAFRNRREG 681
           LC+LR ADPQKLV+ KEE SEMGGYFILNGLERVVRLLI+PKRNYP SM R++F +RREG
Sbjct: 126 LCNLRGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREG 185

Query: 682 FTDKAVVIRCVREDQSAVTLNLYYLSNGSARVGFRIRGRENLLPIGLVLKALIDTTDHEI 861
           +TDKAVVIRCVR DQS++++ LYYL NGSAR+GF +RGRE LLP+G++LKALIDTTD EI
Sbjct: 186 YTDKAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREI 245

Query: 862 FMSLASVYNDKYEKAKGCVG 921
           +++L S YN+KYEK KG VG
Sbjct: 246 YVNLTSCYNEKYEKGKGAVG 265


>ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
           max]
          Length = 1175

 Score =  379 bits (974), Expect = e-103
 Identities = 181/260 (69%), Positives = 217/260 (83%)
 Frame = +1

Query: 142 PDYEPLRALFSHHIHSFDHLVEYGLEKALMNIKPIEVIDSNTKLKLRIWFEKPELYPPQK 321
           PD+E LR LF HHI SFD++ + GLE  L +IKPIEV D  T  KLRIW + P LYPPQK
Sbjct: 9   PDFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQK 68

Query: 322 ERLSRTVREALYPFECRQAKISYTGKFLVDVCFKYGDGPGGAVIREKINFGQLPIMLKSK 501
           ER+SRT+REAL PFECRQAKISY GK  +DVCF+Y DGP   +IRE INFGQ PIML+SK
Sbjct: 69  ERISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGP---IIRENINFGQFPIMLQSK 125

Query: 502 LCHLRDADPQKLVTCKEEPSEMGGYFILNGLERVVRLLIVPKRNYPTSMARSAFRNRREG 681
           LC+LR ADPQKLV+ +EE SEMGGYFILNGLERV+RLLI+PKRN+P SM R++F +RREG
Sbjct: 126 LCNLRGADPQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSDRREG 185

Query: 682 FTDKAVVIRCVREDQSAVTLNLYYLSNGSARVGFRIRGRENLLPIGLVLKALIDTTDHEI 861
           +TDKA+VIRCVR DQS++++ LYYL NGSAR+GF +RGRE LLP+G++LKALIDTTD EI
Sbjct: 186 YTDKAIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREI 245

Query: 862 FMSLASVYNDKYEKAKGCVG 921
           +++L S YN+KYEK KG VG
Sbjct: 246 YVNLTSCYNEKYEKGKGAVG 265


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