BLASTX nr result

ID: Atractylodes21_contig00035687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035687
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283504.2| PREDICTED: uncharacterized protein LOC100260...    82   4e-14
emb|CBI19365.3| unnamed protein product [Vitis vinifera]               82   4e-14
gb|ACV71017.1| UPA17 [Capsicum annuum]                                 77   1e-12
ref|XP_004171939.1| PREDICTED: growth-regulating factor 6-like [...    75   5e-12
ref|XP_004143032.1| PREDICTED: growth-regulating factor 6-like [...    75   5e-12

>ref|XP_002283504.2| PREDICTED: uncharacterized protein LOC100260890 [Vitis vinifera]
          Length = 604

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 49/84 (58%), Positives = 57/84 (67%), Gaps = 10/84 (11%)
 Frame = +2

Query: 2   LRMGLGRGTV---PNTQHANQGPVPWETSMGGPLGEVLQHSTNN------SPSALNLMTE 154
           ++MGLG G+V   PN + AN  P+ WETSMGGPLGEVL HSTNN      + SALNLMTE
Sbjct: 482 IQMGLGVGSVLNEPNQRQANWIPISWETSMGGPLGEVL-HSTNNNGGDCKNSSALNLMTE 540

Query: 155 GWDDG-RKTAPPSRVLQKNSLGHL 223
           GWD   R  + P+ VLQK S G L
Sbjct: 541 GWDGSPRLGSSPTGVLQKTSFGSL 564


>emb|CBI19365.3| unnamed protein product [Vitis vinifera]
          Length = 475

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 49/84 (58%), Positives = 57/84 (67%), Gaps = 10/84 (11%)
 Frame = +2

Query: 2   LRMGLGRGTV---PNTQHANQGPVPWETSMGGPLGEVLQHSTNN------SPSALNLMTE 154
           ++MGLG G+V   PN + AN  P+ WETSMGGPLGEVL HSTNN      + SALNLMTE
Sbjct: 353 IQMGLGVGSVLNEPNQRQANWIPISWETSMGGPLGEVL-HSTNNNGGDCKNSSALNLMTE 411

Query: 155 GWDDG-RKTAPPSRVLQKNSLGHL 223
           GWD   R  + P+ VLQK S G L
Sbjct: 412 GWDGSPRLGSSPTGVLQKTSFGSL 435


>gb|ACV71017.1| UPA17 [Capsicum annuum]
          Length = 596

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 10/83 (12%)
 Frame = +2

Query: 5   RMGLGRGTVPNTQHANQG---PVPWETSMGGPLGEVLQHSTNNSP------SALNLMTEG 157
           +MGLG GT+ +  +  QG   P+ WE+SMGGPLGEVL HSTN+S       SALNLMTEG
Sbjct: 475 QMGLGIGTIISEHNQRQGSWIPISWESSMGGPLGEVL-HSTNSSSGDCKNNSALNLMTEG 533

Query: 158 WD-DGRKTAPPSRVLQKNSLGHL 223
           WD   R  + P+ VLQK+S G L
Sbjct: 534 WDRSPRMGSSPTGVLQKSSFGSL 556


>ref|XP_004171939.1| PREDICTED: growth-regulating factor 6-like [Cucumis sativus]
          Length = 664

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 42/81 (51%), Positives = 52/81 (64%), Gaps = 9/81 (11%)
 Frame = +2

Query: 2   LRMGLGRGTV---PNTQHANQGPVPWETSMGGPLGEVLQHSTNN-----SPSALNLMTEG 157
           ++MGLG G V   PN + AN  P+ WE+SMGGPLGEVL  + NN     S S LNLMTEG
Sbjct: 541 IQMGLGVGNVMDEPNNRQANWIPISWESSMGGPLGEVLNSTNNNGGESKSSSMLNLMTEG 600

Query: 158 WDDGRKT-APPSRVLQKNSLG 217
           WD+     + P+ VLQK + G
Sbjct: 601 WDNSPSLGSSPTGVLQKTAFG 621


>ref|XP_004143032.1| PREDICTED: growth-regulating factor 6-like [Cucumis sativus]
          Length = 672

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 42/81 (51%), Positives = 52/81 (64%), Gaps = 9/81 (11%)
 Frame = +2

Query: 2   LRMGLGRGTV---PNTQHANQGPVPWETSMGGPLGEVLQHSTNN-----SPSALNLMTEG 157
           ++MGLG G V   PN + AN  P+ WE+SMGGPLGEVL  + NN     S S LNLMTEG
Sbjct: 549 IQMGLGVGNVMDEPNNRQANWIPISWESSMGGPLGEVLNSTNNNGGESKSSSMLNLMTEG 608

Query: 158 WDDGRKT-APPSRVLQKNSLG 217
           WD+     + P+ VLQK + G
Sbjct: 609 WDNSPSLGSSPTGVLQKTAFG 629


Top