BLASTX nr result

ID: Atractylodes21_contig00035639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035639
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine...   167   1e-39
emb|CBI31423.3| unnamed protein product [Vitis vinifera]              167   1e-39
ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine...   167   1e-39
ref|XP_003536335.1| PREDICTED: uncharacterized RNA pseudouridine...   162   3e-38
ref|XP_002879786.1| pseudouridine synthase family protein [Arabi...   160   1e-37

>ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
           [Cucumis sativus] gi|449490423|ref|XP_004158601.1|
           PREDICTED: uncharacterized RNA pseudouridine synthase
           aq_1464-like [Cucumis sativus]
          Length = 398

 Score =  167 bits (422), Expect = 1e-39
 Identities = 80/97 (82%), Positives = 91/97 (93%)
 Frame = -1

Query: 293 GYICSSGESQTKSVISLFNDYMKSWDKRNPGQTKPRLFTVGRLDVATTGLIIVTNDGEFA 114
           GYICSSG+ ++KSVISLF+DY+KSWDK  PGQ KPRLFTVGRLDVATTGLIIVTNDG+FA
Sbjct: 219 GYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFA 278

Query: 113 QKISHPSSGLSKEYIATIDGTVNKRHLVAISEGTVID 3
           Q ISHPSSGLSKEYIA IDGTV+K++L+AISEGT+ID
Sbjct: 279 QGISHPSSGLSKEYIAAIDGTVSKQNLIAISEGTIID 315


>emb|CBI31423.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  167 bits (422), Expect = 1e-39
 Identities = 78/97 (80%), Positives = 91/97 (93%)
 Frame = -1

Query: 293 GYICSSGESQTKSVISLFNDYMKSWDKRNPGQTKPRLFTVGRLDVATTGLIIVTNDGEFA 114
           GYICSSGE ++KSV+ LF+DY+KSW+K+NPG  KPR+FTVGRLDVATTGLII+TNDG+FA
Sbjct: 117 GYICSSGEKESKSVLCLFDDYLKSWNKQNPGVPKPRIFTVGRLDVATTGLIILTNDGDFA 176

Query: 113 QKISHPSSGLSKEYIATIDGTVNKRHLVAISEGTVID 3
           QK+SHPSS LSKEYIATIDG VNKRHL+AISEGTVI+
Sbjct: 177 QKLSHPSSKLSKEYIATIDGVVNKRHLIAISEGTVIE 213


>ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464
           isoform 1 [Vitis vinifera]
          Length = 393

 Score =  167 bits (422), Expect = 1e-39
 Identities = 78/97 (80%), Positives = 91/97 (93%)
 Frame = -1

Query: 293 GYICSSGESQTKSVISLFNDYMKSWDKRNPGQTKPRLFTVGRLDVATTGLIIVTNDGEFA 114
           GYICSSGE ++KSV+ LF+DY+KSW+K+NPG  KPR+FTVGRLDVATTGLII+TNDG+FA
Sbjct: 214 GYICSSGEKESKSVLCLFDDYLKSWNKQNPGVPKPRIFTVGRLDVATTGLIILTNDGDFA 273

Query: 113 QKISHPSSGLSKEYIATIDGTVNKRHLVAISEGTVID 3
           QK+SHPSS LSKEYIATIDG VNKRHL+AISEGTVI+
Sbjct: 274 QKLSHPSSKLSKEYIATIDGVVNKRHLIAISEGTVIE 310


>ref|XP_003536335.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
           [Glycine max]
          Length = 399

 Score =  162 bits (409), Expect = 3e-38
 Identities = 76/97 (78%), Positives = 89/97 (91%)
 Frame = -1

Query: 293 GYICSSGESQTKSVISLFNDYMKSWDKRNPGQTKPRLFTVGRLDVATTGLIIVTNDGEFA 114
           GYICSSGE+++KSVISLF+DY+ SW K++PG   PRLFTVGRLDVATTGLIIVTNDG+FA
Sbjct: 220 GYICSSGENESKSVISLFDDYLNSWGKKHPGVPTPRLFTVGRLDVATTGLIIVTNDGDFA 279

Query: 113 QKISHPSSGLSKEYIATIDGTVNKRHLVAISEGTVID 3
           QK+SHPSS LSKEYIATIDG V+KRHL+AISEGT ++
Sbjct: 280 QKLSHPSSNLSKEYIATIDGLVHKRHLIAISEGTTVE 316


>ref|XP_002879786.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297325625|gb|EFH56045.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 412

 Score =  160 bits (404), Expect = 1e-37
 Identities = 73/97 (75%), Positives = 87/97 (89%)
 Frame = -1

Query: 293 GYICSSGESQTKSVISLFNDYMKSWDKRNPGQTKPRLFTVGRLDVATTGLIIVTNDGEFA 114
           GYICSSGE + KSVISLF++Y+ SWDKRNPG  KPRLFTVGRLDVATTGLI+VTNDG+FA
Sbjct: 233 GYICSSGEKEIKSVISLFDEYLSSWDKRNPGTPKPRLFTVGRLDVATTGLIVVTNDGDFA 292

Query: 113 QKISHPSSGLSKEYIATIDGTVNKRHLVAISEGTVID 3
           QK+SHPSS L KEYI T+ G ++KRHL+AISEGT+++
Sbjct: 293 QKLSHPSSSLPKEYITTVVGDIHKRHLMAISEGTIVE 329


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